Co-expression analysis

Gene ID Os07g0171300
Gene name
Homology with ArabidopsisSimilar to At3g03940: protein kinase family protein (HF=4e-53)
Module size 6 genes
NF 0.14
%ile 11.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.95Os07g0171300AK100663.1-Protein kinase domain containing protein4e-53At3g03940protein kinase family proteinO.I.H.G.S.X.
0.2219.40.96Os09g0249700AK069757.1-Protein phosphatase 2A A subunit (Phosphatase 2Aregulatory A subunit)3e-87At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)O.I.H.G.S.X.
0.127.20.95Os03g0711200AK063479.1-Phosphatidylinositol 4-kinase alpha (Fragment)2e-11At1g51040phosphatidylinositol 4-kinase, putativeO.I.H.G.S.X.
0.116.50.97Os02g0135800AB055156.1-Sec13-like protein (Fragment)6e-11At2g30050transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.084.20.97Os01g0920400AK073965.1-Dynamin family protein1e-13At4g33650DRP3A (DYNAMIN-RELATED PROTEIN 3A)O.I.H.G.S.X.
0.063.00.97Os01g0253100AK067133.1-Pto kinase interactor 16e-12At4g02010protein kinase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.398.1GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
10.298.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.396.7GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.196.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.096.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.696.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.596.3GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.496.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.296.0GSM377079Genomic DNA - 45 day old leaf sample - mutant g6686GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.296.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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