CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os07g0164800

Gene name
Homology with Arabidopsis Similar to At1g22230: unknown protein (HF=2e-1)

Module size 6 genes

NF 0.10

%ile 7.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.73 91.1 0.82 Os07g0164800 AK070973.1 - Hypothetical protein 2e-1 At1g22230 unknown protein O.I. H.G. S.X.
0.33 38.8 0.84 Os05g0141700 AK065644.1 - Phosphoglycerate/bisphosphoglycerate mutase familyprotein 4e-8 At3g05170 phosphoglycerate/bisphosphoglycerate mutase family protein O.I. H.G. S.X.
0.15 10.3 0.84 Os04g0550200 AK108473.1 - Pathogenesis-related transcriptional factor andERF domain containing protein 2e-6 At2g35700 ERF38 (ERF FAMILY PROTEIN 38) O.I. H.G. S.X.
0.15 10.3 0.85 Os06g0164400 D43106 - Basic helix-loop-helix dimerisation region bHLHdomain containing protein 6e+0 At4g12860 UNE14 (unfertilized embryo sac 14) O.I. H.G. S.X.
0.04 2.0 0.84 Os02g0789600 AK112100.1 - Quinonprotein alcohol dehydrogenase-like domaincontaining protein 2e-8 At3g19240 - O.I. H.G. S.X.
0.04 2.0 0.83 Os03g0199100 AK069890.1 - Protein of unknown function DUF677 family protein 3e-1 At2g36100 integral membrane family protein O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
51.3 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
31.8 99.7 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
8.4 97.7 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.3 97.7 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.5 97.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.1 97.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.5 97.2 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.3 97.2 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.0 97.0 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.4 96.8 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage