Co-expression analysis

Gene ID Os07g0115500
Gene name
Homology with ArabidopsisSimilar to At4g32150: ATVAMP711 (ARABIDOPSIS THALIANA VESICLE-ASSOCIATED MEMBRANE PROTEIN 711) (HF=5e+0)
Module size 14 genes
NF 0.22
%ile 20.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9399.20.79Os07g0115500AK108206.1-Conserved hypothetical protein5e+0At4g32150ATVAMP711 (ARABIDOPSIS THALIANA VESICLE-ASSOCIATED MEMBRANE PROTEIN 711)O.I.H.G.S.X.
0.3338.80.92Os09g0542100AK105001.2-Peptidase A1, pepsin family protein9e-1At4g35880aspartyl protease family proteinO.I.H.G.S.X.
0.3134.50.92Os06g0634300AK070867.1-Growth factor like protein4e-2At4g12720NUDT7O.I.H.G.S.X.
0.2625.60.90Os03g0726500AK069807.1-Conserved hypothetical protein2e-11At2g36630unknown proteinO.I.H.G.S.X.
0.2524.10.90Os02g0611200BM037932-S-adenosylmethionine decarboxylase family protein3e+0At5g59880ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)O.I.H.G.S.X.
0.2321.20.92Os02g0680600AK060238.1-2-C-methyl-D-erythritol 2,4-cyclodiphosphatesynthase, chloroplast precursor (EC 4.6.1.12) (MECPS)(MECDP-synthase)9e-3At1g63970ISPFO.I.H.G.S.X.
0.2016.50.92Os07g0227800CB620518-ABC-1 domain containing protein4e-18At5g05200ABC1 family proteinO.I.H.G.S.X.
0.1712.60.86Os04g0119500AK063189.1-Membrane related protein-like2e-2At1g64720CP5O.I.H.G.S.X.
0.1712.60.92Os03g0139400AK070427.1-Hypothetical protein2e-1At2g15680calmodulin-related protein, putativeO.I.H.G.S.X.
0.1611.30.92Os02g0745700AK103058.1-Sterol desaturase family protein2e-25At1g69640SBH1 (SPHINGOID BASE HYDROXYLASE 1)O.I.H.G.S.X.
0.1510.30.87Os08g0434300AK058477.1-Malate dehydrogenase precursor (EC 1.1.1.37)3e-46At3g47520MDH (MALATE DEHYDROGENASE)O.I.H.G.S.X.
0.116.50.94Os02g0529400AK121301.1-Plant neutral invertase family protein3e-38At5g22510beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeO.I.H.G.S.X.
0.116.50.90Os04g0623300CB618007-Flavin-containing amine oxidase family protein2e-18At2g43020ATPAO2 (Polyamine oxidase 2)O.I.H.G.S.X.
0.073.70.90Os04g0423600AK065331.1-Nuclear protein SET domain containing protein8e+0At5g15948CPuORF10 (Conserved peptide upstream open reading frame 10)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.698.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.198.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.998.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.997.8GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1181GO:0006597The chemical reactions and pathways resulting in the formation of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging.Link to AmiGO
0.1051GO:0006777The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands.Link to AmiGO
0.1051GO:0008295The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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