Co-expression analysis

Gene ID Os06g0695600
Gene name
Homology with ArabidopsisSimilar to At5g24870: zinc finger (C3HC4-type RING finger) family protein (HF=4e-10)
Module size 6 genes
NF 0.38
%ile 44.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5371.30.89Os06g0695600AK066069.1-Zn-finger, RING domain containing protein4e-10At5g24870zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5573.70.91Os01g0159300AK073728.1-Zn-finger, RING domain containing protein1e+0At3g61370unknown proteinO.I.H.G.S.X.
0.4762.30.89Os02g0180700AK070746.1-Cinnamoyl-CoA reductase (EC 1.2.1.44)7e-7At1g80820CCR2 (CINNAMOYL COA REDUCTASE)O.I.H.G.S.X.
0.4051.10.90Os03g0801900AK106415.1-Protein of unknown function DUF569 family protein7e-1At1g55140RNA binding / ribonuclease IIIO.I.H.G.S.X.
0.3236.30.90Os03g03070009631.m01916-Hypothetical protein1e-7At1g56423unknown proteinO.I.H.G.S.X.
0.149.30.89Os01g0667900AK105335.1-Glutaredoxin domain containing protein2e+0At4g38140zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.098.3GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
5.296.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.696.3GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.596.3GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.496.2GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.496.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.396.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.296.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.196.0GSM159203Inflorescence (P5, 15 - 22 cm), biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO
4.196.0GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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