Co-expression analysis

Gene ID Os06g0685100
Gene name
Homology with ArabidopsisSimilar to At3g42310: unknown protein (HF=2e-2)
Module size 17 genes
NF 0.73
%ile 95.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7088.40.98Os06g06851009634.m04589-COBRA-like protein 10 precursor2e-2At3g42310unknown proteinO.I.H.G.S.X.
0.8596.10.99Os02g0214400AK101009.1-Pectate lyase homolog (EC 4.2.2.2) (Fragment)4e+0At4g13710pectate lyase family proteinO.I.H.G.S.X.
0.8395.80.99Os02g0187400AK068914.1-Glycerophosphoryl diester phosphodiesterase familyprotein2e-2At5g55480SVL1 (SHV3-LIKE 1)O.I.H.G.S.X.
0.8395.80.99Os03g0738700AK111764.1-WD40-like domain containing protein4e+0At2g26490transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.8094.60.99Os05g0149100AK107944.1-C2 domain containing protein9e-1At4g09680unknown proteinO.I.H.G.S.X.
0.7993.60.99Os05g0595000AK071326.1-Allergen V5/Tpx-1 related family protein1e+0At3g60420-O.I.H.G.S.X.
0.7189.60.98Os06g0144900AK070509.1--9e-1At5g04310pectate lyase family proteinO.I.H.G.S.X.
0.7088.40.99Os09g0572800AK120781.1-Pollen Ole e 1 allergen and extensin domaincontaining protein3e-1At5g58412-O.I.H.G.S.X.
0.7088.40.99Os11g0512800AK064740.1-Hypothetical protein6e+0At5g28020CYSD2 (CYSTEINE SYNTHASE D2)O.I.H.G.S.X.
0.6987.90.99Os08g0398500AK072742.1-KED-like protein4e-1At2g39320OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.6787.20.99Os04g0532500AK069907.1-Transcription factor L28e-6At3g61230LIM domain-containing proteinO.I.H.G.S.X.
0.6787.20.99Os08g0178200AK070877.1-Monosaccharide transporter 33e-7At1g11260STP1 (SUGAR TRANSPORTER 1)O.I.H.G.S.X.
0.6787.20.99Os04g0489800AK100423.1-ARM repeat fold domain containing protein2e-3At1g24330armadillo/beta-catenin repeat family protein / U-box domain-containing family proteinO.I.H.G.S.X.
0.6583.80.99Os02g0659100AK107559.1-Zn-finger, C2H2 type domain containing protein8e-2At5g41440zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6382.70.98Os09g0433700AK072369.1-Pectinmethylesterase precursor (EC 3.1.1.11)(Fragment)7e-2At4g15980pectinesterase family proteinO.I.H.G.S.X.
0.6382.70.99Os04g0458900AK121454.1-Pectin methylesterase-like protein7e-2At2g47030VGDH1O.I.H.G.S.X.
0.6281.50.99Os04g0641200AK100257.1-Pectinesterase (EC 3.1.1.11) (Fragment)4e-1At2g47040VGD1 (VANGUARD1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.999.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.998.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.897.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1673GO:0042545The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.Link to AmiGO
0.0741GO:0006071The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids.Link to AmiGO
0.0381GO:0006350The synthesis of either RNA on a template of DNA or DNA on a template of RNA.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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