Co-expression analysis

Gene ID Os06g0663200
Gene name
Homology with ArabidopsisSimilar to At3g28690: protein kinase, putative (HF=3e-10)
Module size 6 genes
NF 0.48
%ile 62.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.2831.10.92Os06g0663200AK100479.1-Protein kinase APK1A (EC 2.7.1.-)3e-10At3g28690protein kinase, putativeO.I.H.G.S.X.
0.7391.10.94Os01g0261200AB028187.1-No apical meristem (NAM) protein domain containingprotein7e-5At3g10490anac052 (Arabidopsis NAC domain containing protein 52)O.I.H.G.S.X.
0.5978.00.93Os04g0584600AB042550.1-Calcium dependent protein kinase3e-44At2g17290CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)O.I.H.G.S.X.
0.5068.00.96Os01g0672400AK064817.1-Drought induced 19 family protein3e-1At4g32090galactosyltransferaseO.I.H.G.S.X.
0.4762.30.93Os05g0473500AK101630.1-Exo70 exocyst complex subunit family protein5e+0At2g48130protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.4762.30.93Os01g0748900AK071946.1-Membrane attack complexcomponent/perforin/complement C9 family protein3e-4At1g29690CAD1 (constitutively activated cell death 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.199.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
19.299.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
18.499.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.998.9GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
15.798.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.298.7GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.598.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.398.6GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.398.4GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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