Co-expression analysis

Gene ID Os06g0663000
Gene name
Homology with ArabidopsisSimilar to At3g08680: leucine-rich repeat transmembrane protein kinase, putative (HF=4e+0)
Module size 11 genes
NF 0.30
%ile 32.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.80.96Os06g06630009634.m04389--4e+0At3g08680leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.3338.80.98Os10g05654009638.m03793--5e-1At2g32890RALFL17 (RALF-LIKE 17)O.I.H.G.S.X.
0.2931.10.97Os03g07043009631.m04853--4e+0At4g00170vesicle-associated membrane family protein / VAMP family proteinO.I.H.G.S.X.
0.2931.10.98Os06g0273301NM_185773.1--4e+0At2g16510vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)O.I.H.G.S.X.
0.2831.10.98Os05g0228900AK108667.1-Conserved hypothetical protein5e-1At1g17310MADS-box protein (AGL100)O.I.H.G.S.X.
0.2625.60.99Os08g04276009636.m03313--4e+0At3g17840RLK902O.I.H.G.S.X.
0.2422.40.97Os07g0121900NM_194210.1--4e+0At1g06850AtbZIP52 (Arabidopsis thaliana basic leucine zipper 52)O.I.H.G.S.X.
0.2117.90.98Os05g02525009633.m01460--8e-3At4g14780protein kinase, putativeO.I.H.G.S.X.
0.2016.50.98Os04g0577600AK107440.1--9e-3At4g39260GR-RBP8O.I.H.G.S.X.
0.2016.50.98Os02g03079009630.m01962-Hypothetical protein2e-1At3g63310glutamate bindingO.I.H.G.S.X.
0.1510.30.98Os02g03008009630.m01889--2e+1At5g28642unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.098.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.798.1GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.498.1GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.797.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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