Co-expression analysis

Gene ID Os06g0660400
Gene name
Homology with ArabidopsisSimilar to At3g26790: FUS3 (FUSCA 3) (HF=7e-5)
Module size 7 genes
NF 0.70
%ile 92.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5371.30.85Os06g0660400AK111110.1-Conserved hypothetical protein7e-5At3g26790FUS3 (FUSCA 3)O.I.H.G.S.X.
0.7793.10.90Os01g0971600AK070366.1-Sn-glycerol-3-phosphate dehydrogenase (Fragment)4e-12At5g40610glycerol-3-phosphate dehydrogenase (NAD+) / GPDHO.I.H.G.S.X.
0.7391.10.90Os01g0905400AK063530.1-Transcriptional factor B3 family protein2e-2At4g14580CIPK4 (CBL-interacting protein kinase 4)O.I.H.G.S.X.
0.6787.20.90Os03g07307009631.m05092--2e-1At2g22980serine-type carboxypeptidaseO.I.H.G.S.X.
0.6787.20.91Os12g0571500AK119942.1-Hypothetical protein3e-1At2g21060ATGRP2B (GLYCINE-RICH PROTEIN 2B)O.I.H.G.S.X.
0.6181.20.85Os08g0338500AK107751.1-Plant invertase/pectin methylesterase inhibitordomain containing protein2e-2At5g40860unknown proteinO.I.H.G.S.X.
0.6181.20.92Os12g0250800CF318760-Hypothetical protein4e+0At5g04390zinc finger (C2H2 type) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
53.399.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.797.6GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
5.796.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.096.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.796.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.796.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.696.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.496.2GSM275410Bala root tip_At the wax layer_rep3GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varietiesLink to GEO
4.196.0GSM99864TCHW P7_ir29 control, biological rep1GSE4438Expression data from rice under salinity stressLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2501GO:0046168The chemical reactions and pathways resulting in the breakdown of glycerol-3-phosphate, a phosphoric monoester of glycerol.Link to AmiGO
0.1251GO:0006072The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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