Co-expression analysis

Gene ID Os06g0657500
Gene name
Homology with ArabidopsisSimilar to At5g57390: AIL5 (AINTEGUMENTA-LIKE 5) (HF=3e-10)
Module size 7 genes
NF 0.79
%ile 97.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.60.90Os06g0657500AK101959.1-ANT (Ovule development protein aintegumenta)3e-10At5g57390AIL5 (AINTEGUMENTA-LIKE 5)O.I.H.G.S.X.
0.8395.80.93Os11g02959009639.m01770-Pathogenesis-related transcriptional factor andERF domain containing protein1e-5At5g65510AIL7 (AINTEGUMENTA-like 7)O.I.H.G.S.X.
0.8094.60.89Os05g0143600AK107844.1-Jacalin-related lectin domain containing protein2e+0At5g26740unknown proteinO.I.H.G.S.X.
0.8094.60.90Os01g0939300AK101079.1-BRCT domain containing protein2e-8At3g21480-O.I.H.G.S.X.
0.7391.10.94Os01g0667400AK064236.1-Conserved hypothetical protein2e-1At3g18880ribosomal protein S17 family proteinO.I.H.G.S.X.
0.7189.60.93Os01g0369200AK073477.1-Cullin family protein3e-4At1g02980CUL2 (CULLIN 2)O.I.H.G.S.X.
0.6079.70.90Os06g0520600AK101510.1-Eukaryotic initiation factor-like protein1e+0At5g03837unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
63.199.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.198.7GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
11.098.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.997.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1001GO:0007049The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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