Co-expression analysis

Gene ID Os06g0634500
Gene name
Homology with ArabidopsisSimilar to At4g22130: SRF8 (STRUBBELIG-RECEPTOR FAMILY 8) (HF=1e-13)
Module size 6 genes
NF 0.44
%ile 55.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5068.00.93Os06g0634500AK111551.1-Protein kinase domain containing protein1e-13At4g22130SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)O.I.H.G.S.X.
0.6787.20.92Os04g0505200AK066703.1-Leucine-rich repeat, plant specific containingprotein1e-7At1g01910anion-transporting ATPase, putativeO.I.H.G.S.X.
0.5068.00.92Os05g0363500CA757967-ARM repeat fold domain containing protein2e+0At3g23245unknown proteinO.I.H.G.S.X.
0.3846.90.91Os05g0140100AK111821.1-Myb, DNA-binding domain containing protein1e-10At1g57560AtMYB50 (myb domain protein 50)O.I.H.G.S.X.
0.3846.90.92Os01g0750000AY327044.1-Ras-related protein RIC21e-20At5g60860AtRABA1f (Arabidopsis Rab GTPase homolog A1f)O.I.H.G.S.X.
0.3032.70.92Os02g0655800AK101947.1-Protein kinase domain containing protein4e-3At5g61570protein kinase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
23.099.3GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.598.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.897.6GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0361GO:0007264Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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