Co-expression analysis

Gene ID Os06g0608600
Gene name
Homology with ArabidopsisSimilar to At5g56020: - (HF=9e-3)
Module size 6 genes
NF 0.33
%ile 36.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.95Os06g0608600AK061418.1-Conserved hypothetical protein9e-3At5g56020-O.I.H.G.S.X.
0.6181.20.94Os04g0600400AK072894.1-Conserved hypothetical protein6e-1At2g35470unknown proteinO.I.H.G.S.X.
0.6079.70.94Os06g0300300AK068813.1-Conserved hypothetical protein2e-3At4g26550-O.I.H.G.S.X.
0.3032.70.94Os05g0279600AK070566.1-Conserved hypothetical protein3e-9At4g30900-O.I.H.G.S.X.
0.2219.40.94Os04g0687300AK060617.1-Heat shock protein DnaJ, N-terminal domaincontaining protein7e-1At3g08000RNA-binding protein, putativeO.I.H.G.S.X.
0.116.50.94Os03g0729900BE040070-BSD protein (Fragment)2e+0At5g27930protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
31.399.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
25.399.5GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.898.5GSM100446Rice Bala 1ppm Arsenate Rep2GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenateLink to GEO
9.998.0GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.097.8GSM174886F FR13 4 dpi rep 1 with array type rice from AffymetrixGSE7256Identification of rice genes differentially expressed upon virulent infection by Magnaporthe griseaLink to GEO
8.497.7GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM174889H FR13 4 dpi rep 2 with array type rice from AffymetrixGSE7256Identification of rice genes differentially expressed upon virulent infection by Magnaporthe griseaLink to GEO
7.097.4GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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