Co-expression analysis

Gene ID Os06g0586700
Gene name
Homology with ArabidopsisSimilar to At5g01510: - (HF=6e-1)
Module size 6 genes
NF 0.08
%ile 5.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5978.00.73Os06g05867009634.m03692--6e-1At5g01510-O.I.H.G.S.X.
0.2016.50.71Os11g0474800AK108710.1-Terpene synthase-like domain containing protein2e-1At5g23950C2 domain-containing proteinO.I.H.G.S.X.
0.1915.10.75Os08g0353700AK058799.1-Conserved hypothetical protein8e-2At1g69470unknown proteinO.I.H.G.S.X.
0.084.20.73Os10g0510100NM_197298.1--1e-1At1g76220unknown proteinO.I.H.G.S.X.
0.042.00.71Os01g0784500AK109693.1-Receptor-like protein kinase 44e-6At1g11410S-locus protein kinase, putativeO.I.H.G.S.X.
0.031.40.76Os03g0221200AK068002.1-Homocysteine S-methyltransferase 1 (EC 2.1.1.10)(S- methylmethionine:homocysteine methyltransferase 1)(SMM:Hcy S- methyltransferase 1) (ZmHMT-1)2e-7At3g25900HMT-1O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
69.299.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
28.899.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
22.699.3GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.799.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
18.499.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.398.4GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.298.4GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.698.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.798.1GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1431GO:0051501The chemical reactions and pathways involving diterpene phytoalexins, a class of diterpene formed in plants in response to fungal infection, physical damage, chemical injury, or a pathogenic process; they are sometimes referred to as plant antibiotics. Diterpenes are unsaturated hydrocarbons containing 20 carbon atoms and 4 branched methyl groups and are made up of isoprenoid units.Link to AmiGO

Inter-species module comparison

A co-expression module including the barley gene, HV_CEa0012H15r2_at, orthologous to the query gene, Os06g0586700

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.1HV_CEa0012H15r2_atAt5g01510--4e+0At1g11450nodulin MtN21 family proteinO.I.H.G.S.X.
0.9198.1Contig15145_atAt5g01510--1e-61At3g09920PIP5K9 (PHOSPHATIDYL INOSITOL MONOPHOSPHATE 5 KINASE)O.I.H.G.S.X.
0.9198.1Contig9426_atAt5g01510--2e-2At5g51340unknown proteinO.I.H.G.S.X.
0.9198.1Contig21454_x_atAt5g01510--4e+0At4g01265raffinose synthase family protein / seed imbibition protein-relatedO.I.H.G.S.X.
0.8394.0Contig23898_atAt5g01510--4e-1At2g01610invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.5774.9Contig21304_s_atAt5g01510--3e+0At5g10390histone H3O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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