Co-expression analysis

Gene ID Os06g0584400
Gene name
Homology with ArabidopsisSimilar to At5g19630: unknown protein (HF=1e+0)
Module size 26 genes
NF 0.32
%ile 35.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.80.74Os06g0584400AK072622.1-Hypothetical protein1e+0At5g19630unknown proteinO.I.H.G.S.X.
0.5371.30.82Os08g0476900AK101432.1-Patatin-like protein 13e+0At4g37060PLP5 (PATATIN-LIKE PROTEIN 5)O.I.H.G.S.X.
0.4458.10.78Os01g0704100AK109776.1--2e-5At1g12940ATNRT2.5 (nitrate transporter2.5)O.I.H.G.S.X.
0.3846.90.85Os01g0297200AK109883.1-AAA ATPase, central region domain containingprotein6e-5At4g25835AAA-type ATPase family proteinO.I.H.G.S.X.
0.3745.00.84Os08g0111300AK110905.1-Transferase family protein2e-1At5g17340unknown proteinO.I.H.G.S.X.
0.3644.00.87Os05g0489900AK070533.1-Calcium/calmodulin-dependent protein kinase2e-5At4g09570CPK4O.I.H.G.S.X.
0.3644.00.78Os07g0600200AK105814.1-Conserved hypothetical protein5e+0At5g55750hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3644.00.83Os07g0668300AK061122.1-Lipolytic enzyme, G-D-S-L family protein1e-2At2g23540GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.3541.70.84Os01g07405009629.m05236-Transferrin receptor-like dimerisation regiondomain containing protein2e-5At3g54720AMP1 (ALTERED MERISTEM PROGRAM 1)O.I.H.G.S.X.
0.3338.80.86Os12g0454800AY572461.1-Histidine kinase7e-3At5g10530lectin protein kinase, putativeO.I.H.G.S.X.
0.3236.30.86Os05g0278500AK067851.1-Transferase family protein2e-1At1g06980unknown proteinO.I.H.G.S.X.
0.3134.50.87Os06g0274800NM_185795.1-Peroxidase 11 precursor (EC 1.11.1.7) (AtperoxP11) (ATP23a/ATP23b)5e-4At1g68850peroxidase, putativeO.I.H.G.S.X.
0.2931.10.89Os02g0579600AY177696.1-Transcription factor MADS277e-19At3g57230AGL16 (AGAMOUS-LIKE 16)O.I.H.G.S.X.
0.2931.10.85Os02g07328009630.m04898-Lipolytic enzyme, G-D-S-L family protein2e+0At2g23540GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.2727.50.87Os02g0139600AK107052.1-Dars-prov protein2e-3At4g26870aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase, putativeO.I.H.G.S.X.
0.2727.50.85Os07g0618400AK111671.1-Protein kinase domain containing protein4e-4At3g13065SRF4 (STRUBBELIG-RECEPTOR FAMILY 4)O.I.H.G.S.X.
0.2625.60.85Os04g0359100AK069384.1-Zinc-containing alcohol dehydrogenase superfamilyprotein2e+0At4g13010oxidoreductase, zinc-binding dehydrogenase family proteinO.I.H.G.S.X.
0.2625.60.79Os07g0499500AK108797.1-Peroxidase 7 precursor (EC 1.11.1.7) (Atperox P7)(ATP30)1e-2At1g30870cationic peroxidase, putativeO.I.H.G.S.X.
0.2422.40.82Os03g0281900AK072135.1-ABC transporter related domain containing protein3e-1At3g53510ABC transporter family proteinO.I.H.G.S.X.
0.2422.40.81Os10g0521500AK105796.1-Esterase/lipase/thioesterase domain containingprotein3e+0At5g02750zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2321.20.88Os05g0245300AB091471.1-Protein of unknown function DUF588 family protein7e+0Atcg00790-O.I.H.G.S.X.
0.2321.20.83Os11g0152700AK102690.1-Transcription factor HBP-1b(C38) (Fragment)3e-1At1g77920bZIP family transcription factorO.I.H.G.S.X.
0.2321.20.84Os05g0586500AK106883.1-Amino acid/polyamine transporter II family protein9e-7At5g41800amino acid transporter family proteinO.I.H.G.S.X.
0.2016.50.83Os07g0639400AK110555.1-Peroxidase 17e-4At4g36430peroxidase, putativeO.I.H.G.S.X.
0.1915.10.86Os02g0722400AK070030.1-Amino acid transporter c (Fragment)2e-4At5g23810AAP7O.I.H.G.S.X.
0.1712.60.90Os10g0390600AK107029.1-1-aminocyclopropane-1-carboxylate synthase familyprotein4e-7At1g72330ALAAT2 (ALANINE AMINOTRANSFERASE 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.798.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.998.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.898.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0691GO:0009826The process by which a cell irreversibly increases in size in one [spatial] dimension or along one axis, resulting in the morphogenesis of the cell.Link to AmiGO
0.0671GO:0009741A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brassinosteroid stimulus.Link to AmiGO
0.0651GO:0006422The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage