Co-expression analysis

Gene ID Os06g0548800
Gene name
Homology with ArabidopsisSimilar to At1g26410: FAD-binding domain-containing protein (HF=2e-2)
Module size 8 genes
NF 0.65
%ile 88.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8896.80.99Os06g0548800AK072611.1-Nectarin 5 (Fragment)2e-2At1g26410FAD-binding domain-containing proteinO.I.H.G.S.X.
0.8896.80.99Os01g0201400AK070397.1-Rapid ALkalinization Factor family protein1e-1At1g27390TOM20-2 (TRANSLOCASE OUTER MEMBRANE 20-2)O.I.H.G.S.X.
0.7591.90.99Os02g0741200AK071385.1-Plant peroxidase family protein1e-12At5g47000peroxidase, putativeO.I.H.G.S.X.
0.6382.70.99Os10g0406100AK072672.1--3e-33At1g01050AtPPa1 (Arabidopsis thaliana pyrophosphorylase 1)O.I.H.G.S.X.
0.6079.70.99Os01g0306200AK071422.1-Conserved hypothetical protein2e+0At4g19270unknown proteinO.I.H.G.S.X.
0.5068.00.99Os07g0259000AK106951.1-Conserved hypothetical protein1e+0At3g56420-O.I.H.G.S.X.
0.4660.90.99Os06g0545400AK072748.1-Polygalacturonase (Fragment)2e-4At2g43860polygalacturonase, putative / pectinase, putativeO.I.H.G.S.X.
0.4660.90.99Os04g0500300AK121460.1-Conserved hypothetical protein1e+0At3g12340FK506 binding / peptidyl-prolyl cis-trans isomeraseO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
26.599.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.999.0GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.498.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.598.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.998.6GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.698.6GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.398.6GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.098.5GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.598.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0211GO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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