Co-expression analysis

Gene ID Os06g0528000
Gene name
Homology with ArabidopsisSimilar to At5g52570: BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2) (HF=1e+0)
Module size 6 genes
NF 0.72
%ile 94.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7793.10.98Os06g0528000NM_196265.1--1e+0At5g52570BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2)O.I.H.G.S.X.
0.8395.80.98Os07g04560009635.m02632--1e+0At4g271502S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2O.I.H.G.S.X.
0.6181.20.98Os09g02593669637.m00619--6e+0At5g60400unknown proteinO.I.H.G.S.X.
0.6181.20.98Os01g0593100NM_192598.1-Hypothetical protein2e+0At1g43330myb family protein-relatedO.I.H.G.S.X.
0.5068.00.98Os03g0566900NM_184753.1--1e+0At3g11600unknown proteinO.I.H.G.S.X.
0.5068.00.98Os05g04397509633.m03398--1e-2At2g41380embryo-abundant protein-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
59.799.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
37.399.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.598.9GSM302916endo6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
13.598.5GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.098.3GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the maize gene, Zm.5527.1.A1_at, orthologous to the query gene, Os06g0528000

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9199.0Zm.5527.1.A1_atAt5g52570--3e-1At3g49950scarecrow transcription factor family proteinO.I.H.G.S.X.
0.2622.7Zm.5201.1.S1_atAt5g52570secondary cell wall-related glycosyltransferase family 47-6e-11At5g61840GUT1O.I.H.G.S.X.
0.2014.2Zm.1305.1.S1_atAt5g52570glycine-rich RNA binding protein-1e-1At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)O.I.H.G.S.X.
0.1710.6Zm.13476.2.S1_atAt5g52570hypothetical protein LOC100276044-4e+0At5g66658unknown proteinO.I.H.G.S.X.
0.158.6Zm.16590.1.S1_atAt5g52570pollen signalling protein with adenylyl cyclase activity-2e+0At3g46530RPP13 (RECOGNITION OF PERONOSPORA PARASITICA 13)O.I.H.G.S.X.
0.115.3Zm.13862.1.S1_atAt5g52570Na+/H+ antiporter NHX5-4e-9At5g55470ATNHX3O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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