Co-expression analysis

Gene ID Os06g0498800
Gene name
Homology with ArabidopsisSimilar to At1g18100: E12A11 (HF=4e-1)
Module size 32 genes
NF 0.71
%ile 93.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8696.40.83Os06g0498800AK107056.1-MOTHER of FT and TF1 protein4e-1At1g18100E12A11O.I.H.G.S.X.
0.8496.00.88Os04g0404400AK112111.1-Bipartite response regulator, C-terminal effectordomain containing protein3e+0At5g45320-O.I.H.G.S.X.
0.8496.00.90Os06g0507100AA753757-Gliadin/LMW glutenin family protein3e+0At1g66480PMI2 (plastid movement impaired 2)O.I.H.G.S.X.
0.8194.80.91Os07g0222000AK107870.1--2e+1At5g47290myb family transcription factorO.I.H.G.S.X.
0.7993.60.89Os07g0212300BI801817-NUDIX hydrolase domain containing protein4e+0At5g01280-O.I.H.G.S.X.
0.7893.40.91Os06g0221300AK108233.1-Dehydration stress-induced protein3e-2At3g10040transcription factorO.I.H.G.S.X.
0.7793.10.89Os07g0214100D11431.1-Seed allergenic protein RA17 precursor5e+0At3g23760-O.I.H.G.S.X.
0.7793.10.91Os06g0133000AB066094.1-Granule-bound starch synthase I, chloroplastprecursor (EC 2.4.1.21)3e-7At1g32900starch synthase, putativeO.I.H.G.S.X.
0.7692.20.87Os05g0432200BI803310-Gibberellin-regulated protein 2 precursor5e+0At4g16515unknown proteinO.I.H.G.S.X.
0.7692.20.90Os07g0213800AK107215.1-Alpha-amylase inhibitor BMAI-1 precursor (AllergenHor v 1) (Alpha- amylase flour inhibitor) (Fragment)6e+0At4g22650-O.I.H.G.S.X.
0.7591.90.89Os07g0214600NM_186509.1-Seed allergenic protein RA17 precursor4e+0At5g57450XRCC3O.I.H.G.S.X.
0.7491.40.91Os02g0202400AK107368.1-Brittle-1 protein, chloroplast precursor8e-1At5g27690heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.7289.80.90Os07g0214300X62091.1-Seed allergenic protein RAG2 precursor5e+0At2g40470LBD15 (LOB DOMAIN-CONTAINING PROTEIN 15)O.I.H.G.S.X.
0.7189.60.89Os12g0269200BI801848-13 kDa prolamin precursor1e+0At4g13830J20 (DNAJ-LIKE 20)O.I.H.G.S.X.
0.7189.60.92Os07g0216600AK107674.1-Cereal seed allergen, trypsin/alpha-amylaseinhibitor family protein5e+0At5g10980histone H3O.I.H.G.S.X.
0.7088.40.89Os07g0216700BI797025-Cereal seed allergen, trypsin/alpha-amylaseinhibitor family protein1e-1At1g22250unknown proteinO.I.H.G.S.X.
0.7088.40.88Os02g0249000AY429650.1--2e-1At2g23560MES7 (METHYL ESTERASE 7)O.I.H.G.S.X.
0.6987.90.89Os06g0507200BI799580-Prolamin1e+0At1g15100RHA2AO.I.H.G.S.X.
0.6987.90.89Os02g0453600AA753290-RmlC-like cupin family protein4e+0At5g03455CDC25O.I.H.G.S.X.
0.6987.90.84Os03g0130300U72942.2-Cp-thionin3e-1At2g02100LCR69 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69)O.I.H.G.S.X.
0.6787.20.87Os10g0539600D13436.1-Protein kinase domain containing protein2e-8At4g35310CPK5 (calmodulin-domain protein kinase 5)O.I.H.G.S.X.
0.6787.20.88Os03g0793700AY098743.2-Globulin 2 (Fragment)4e+0At4g36990HSF4 (HEAT SHOCK FACTOR 4)O.I.H.G.S.X.
0.6787.20.87Os01g0898500AK106563.1-Patatin-like protein 2 (Fragment)8e-1At2g26560PLA2A (PHOSPHOLIPASE A 2A)O.I.H.G.S.X.
0.6787.20.88Os10g0492600AB114828.1-Tonoplast membrane integral protein ZmTIP3-16e-4At2g01340unknown proteinO.I.H.G.S.X.
0.6787.20.91Os04g0164900BI799485-Starch debranching enzyme7e-6At5g04360ATLDA (LIMIT DEXTRINASE)O.I.H.G.S.X.
0.6683.90.88Os03g0111300AK062506.1-Nonspecific lipid-transfer protein 2 (nsLTP2) (7kDa lipid transfer protein)3e-1At3g22275unknown proteinO.I.H.G.S.X.
0.6583.80.89Os07g0638300AY336994.1-Peroxiredoxin 6 (EC 1.11.1.-) (Antioxidant protein2) (1-Cys peroxiredoxin) (1-Cys PRX) (Acidiccalcium-independent phospholipase A2) (EC 3.1.1.-)(aiPLA2) (Non-selenium glutathione peroxidase) (EC1.11.1.7) (NSGPx) (24 kDa protein) (Liver 2D page spot40) (Red blood cells page spot 12)9e-3At1g48130ATPER1O.I.H.G.S.X.
0.6583.80.87Os03g0336100AK105307.1-RmlC-like cupin family protein2e-1At2g37750unknown proteinO.I.H.G.S.X.
0.6281.50.89Os01g0393100AK107407.1-No apical meristem (NAM) protein domain containingprotein4e-24At5g18270ANAC087O.I.H.G.S.X.
0.6079.70.87Os08g0327700AK107930.1-Late embryogenesis abundant (LEA) group 1 familyprotein2e+0At3g15340PPI2 (proton pump interactor 2)O.I.H.G.S.X.
0.5877.00.87Os03g0663800AK105347.1--8e-3At1g58420-O.I.H.G.S.X.
0.5676.30.87Os06g0726400AF136268.1-Branching enzyme-I precursor (Starch-branchingenzyme I)3e-5At2g36390SBE2.1 (starch branching enzyme 2.1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.699.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.598.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.098.2GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0591GO:0005982The chemical reactions and pathways involving starch, the most important reserve polysaccharide in plants. It is a glucan consisting of two components, amylose and amylopectin, which are both glucose homopolymers. Starch is synthesized as a temporary storage form of carbon and can be catabolized to produce sucrose.Link to AmiGO
0.0591GO:0006839Transport of substances into, out of or within a mitochondrion.Link to AmiGO
0.0571GO:0009790The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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