Co-expression analysis

Gene ID Os06g0496800
Gene name
Homology with ArabidopsisSimilar to At3g25882: NIMIN-2 (NIM1-INTERACTING 2) (HF=9e-1)
Module size 11 genes
NF 0.05
%ile 3.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8796.60.90Os06g0496800AK105608.1-Serine/threonine kinase receptor precursor9e-1At3g25882NIMIN-2 (NIM1-INTERACTING 2)O.I.H.G.S.X.
0.149.30.92Os10g0478900AK062836.1-Conserved hypothetical protein7e-3At3g17160unknown proteinO.I.H.G.S.X.
0.149.30.90Os03g0298300AK061180.1-Protein of unknown function DUF588 family protein2e+0At3g61415ASK21 (ARABIDOPSIS SKP1-LIKE 21)O.I.H.G.S.X.
0.105.70.92Os01g0853400AY168645.1-Coronatine-insensitive 12e-2At2g39940COI1 (CORONATINE INSENSITIVE 1)O.I.H.G.S.X.
0.105.70.94Os05g0384800AK069987.1-Chromosome condensation regulator protein(Fragment)8e-34At5g19420Ran GTPase binding / chromatin binding / zinc ion bindingO.I.H.G.S.X.
0.094.90.93Os10g0564200AK072487.1-Homeodomain-like containing protein5e-5At2g44730transcription factorO.I.H.G.S.X.
0.052.50.93Os01g0761300NM_191333.1-Long-chain-fatty-acid-CoA ligase-like protein7e-8At3g16170acyl-activating enzyme 13 (AAE13)O.I.H.G.S.X.
0.042.00.92Os04g0606500AK068251.1-Conserved hypothetical protein3e-7At1g16860merozoite surface protein-relatedO.I.H.G.S.X.
0.031.40.93Os06g0194000BP184460-Ethylene responsive element binding factor 5(AtERF5)9e-7At3g14230RAP2.2O.I.H.G.S.X.
0.021.00.93Os01g0831200AK070208.1-Ubiquitin domain containing protein4e-2At3g51780ATBAG4 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 4)O.I.H.G.S.X.
0.021.00.92Os11g0199600AK101774.1-Zn-finger, CCHC type domain containing protein7e-1At5g61890AP2 domain-containing transcription factor family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.499.3GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.098.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.898.0GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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