Co-expression analysis

Gene ID Os06g0494550
Gene name
Homology with ArabidopsisSimilar to At5g03070: IMPA-9 (IMPORTIN ALPHA ISOFORM 9) (HF=4e+0)
Module size 6 genes
NF 0.29
%ile 30.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5573.70.99Os06g04945509634.m02867--4e+0At5g03070IMPA-9 (IMPORTIN ALPHA ISOFORM 9)O.I.H.G.S.X.
0.4660.90.99Os02g08267009630.m05791-Cyclin-like F-box domain containing protein7e-1At5g03060unknown proteinO.I.H.G.S.X.
0.4458.10.99Os01g05043009629.m02979--3e+0At3g12012CPuORF20 (Conserved peptide upstream open reading frame 20)O.I.H.G.S.X.
0.4051.10.99Os10g05353009638.m03521--4e+0At5g56990-O.I.H.G.S.X.
0.2117.90.99Os01g08535009629.m06273--1e+0At5g54070AT-HSFA9O.I.H.G.S.X.
0.116.50.99Os01g09217669629.m06883--1e+0At5g16286unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
62.499.9GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
54.399.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.098.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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