Co-expression analysis

Gene ID Os06g0486400
Gene name
Homology with ArabidopsisSimilar to At5g14720: protein kinase family protein (HF=6e-40)
Module size 6 genes
NF 0.44
%ile 55.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5676.30.95Os06g0486400AK065283.1-Protein kinase domain containing protein6e-40At5g14720protein kinase family proteinO.I.H.G.S.X.
0.5573.70.96Os02g0255000AK112041.1-Cyclic nucleotide-gated ion channel 1 (AtCNGC1)(Cyclic nucleotide-and calmodulin-regulated ion channel1)2e-6At3g48010ATCNGC16O.I.H.G.S.X.
0.4458.10.96Os07g0167100AK063292.1-NAD+ synthase domain containing protein9e-11At1g55090carbon-nitrogen hydrolase family proteinO.I.H.G.S.X.
0.4458.10.96Os03g0334700AK063540.1-ATPase, E1-E2 type family protein5e-19At5g04930ALA1 (aminophospholipid ATPase1)O.I.H.G.S.X.
0.2931.10.96Os02g0714000AK067428.1-RGP-3 (Fragment)3e-1At1g22910RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.2524.10.96Os12g0548200AK103433.1-Heat shock protein DnaJ, N-terminal domaincontaining protein2e-12At4g12780heat shock protein bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
27.499.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.798.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.098.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.398.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0951GO:0006811The directed movement of charged atoms or small charged molecules into, out of, within or between cells.Link to AmiGO
0.0571GO:0006813The directed movement of potassium ions (K+) into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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