Co-expression analysis

Gene ID Os06g0474200
Gene name
Homology with ArabidopsisSimilar to At3g54170: ATFIP37 (ARABIDOPSIS THALIANA FKBP12 INTERACTING PROTEIN 37) (HF=3e-24)
Module size 16 genes
NF 0.25
%ile 23.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.94Os06g04742009634.m02668-Conserved hypothetical protein3e-24At3g54170ATFIP37 (ARABIDOPSIS THALIANA FKBP12 INTERACTING PROTEIN 37)O.I.H.G.S.X.
0.4458.10.95Os11g0544600AK064128.1-Hypothetical protein1e-3At4g08310unknown proteinO.I.H.G.S.X.
0.3846.90.95Os07g0265600AY323483.1-Stem cell self-renewal protein Piwi domaincontaining protein5e-5At5g21150PAZ domain-containing protein / piwi domain-containing proteinO.I.H.G.S.X.
0.3440.00.95Os06g0285900AK102409.1-ARM repeat fold domain containing protein1e-11At5g47690bindingO.I.H.G.S.X.
0.3338.80.95Os05g0120100AK060437.1--1e-17At2g37340RSZ33O.I.H.G.S.X.
0.2931.10.95Os05g0173700AK063470.1-DNA replication licensing factor MCM3 homolog(Replication origin activator) (ROA protein) (Fragment)2e-10At5g46280DNA replication licensing factor, putativeO.I.H.G.S.X.
0.2117.90.96Os10g0466300AK064778.1-U box domain containing protein1e-6At2g33340nucleotide binding / ubiquitin-protein ligaseO.I.H.G.S.X.
0.2117.90.96Os05g0133900AK063482.1-Conserved hypothetical protein1e+0At2g17705unknown proteinO.I.H.G.S.X.
0.2117.90.97Os09g0515100AK110315.1-Bromodomain containing protein7e-62At1g05910cell division cycle protein 48-related / CDC48-relatedO.I.H.G.S.X.
0.2016.50.96Os03g0748400AK070433.1-Serine protein kinase-like protein1e-16At3g44850protein kinase-relatedO.I.H.G.S.X.
0.1813.70.97Os04g0101300CB627192-MRG family protein1e-1At1g02740chromatin bindingO.I.H.G.S.X.
0.1813.70.96Os11g0643700CB632735-Nuclear pore protein 84/107 family protein6e+0Atmg00150-O.I.H.G.S.X.
0.1611.30.95Os03g0628900AK103619.1-Prefoldin family protein1e-4At1g08780AIP3 (ABI3-INTERACTING PROTEIN 3)O.I.H.G.S.X.
0.1510.30.97Os05g0592400AB037144.1-UV-damaged DNA binding protein3e-45At4g05420DDB1A (DAMAGED DNA BINDING PROTEIN 1A)O.I.H.G.S.X.
0.149.30.96Os03g0270200AK102826.1-SRm160/300 splicing coactivator (Fragment)4e-7At2g29210splicing factor PWI domain-containing proteinO.I.H.G.S.X.
0.138.20.95Os02g0208200AK067315.1-Hypothetical protein5e-1At1g3385040S ribosomal protein S15, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.698.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.498.6GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.298.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.298.3GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage