Co-expression analysis

Gene ID Os06g0320700
Gene name
Homology with ArabidopsisSimilar to At5g13030: unknown protein (HF=2e-33)
Module size 7 genes
NF 0.51
%ile 67.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.60.95Os06g0320700AK072187.1-Protein of unknown function UPF0061 family protein2e-33At5g13030unknown proteinO.I.H.G.S.X.
0.6787.20.95Os02g0125100AK101889.1-Cis-homoaconitase family protein1e-24At4g13430IIL1 (ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1)O.I.H.G.S.X.
0.5573.70.96Os05g0101200AY262026.1-Peroxisomal membrane anchor protein (Pex14p)domain containing protein1e+0At5g61660glycine-rich proteinO.I.H.G.S.X.
0.3644.00.97Os01g0104100AK072797.1-The start codon is not identified.1e-2At3g54360protein binding / zinc ion bindingO.I.H.G.S.X.
0.3338.80.95Os12g0206700AK071313.1-Hypothetical protein4e-1At3g11110zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3338.80.96Os03g0809300AK103140.1-Protein phosphatase 2C-like domain containingprotein1e-3At4g16580catalyticO.I.H.G.S.X.
0.2931.10.96Os02g0201000AK064792.1-Conserved hypothetical protein7e-2At5g25360unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
30.399.7GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
27.799.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.898.0GSM195228EmbryoGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
5.997.0GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.896.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.396.1GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.296.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.995.8GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.695.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.695.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2221GO:0009409A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.Link to AmiGO
0.2221GO:0009414A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.Link to AmiGO
0.2221GO:0009651A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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