Co-expression analysis

Gene ID Os06g0300300
Gene name
Homology with ArabidopsisSimilar to At4g26550: - (HF=2e-3)
Module size 6 genes
NF 0.42
%ile 52.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.94Os06g0300300AK068813.1-Conserved hypothetical protein2e-3At4g26550-O.I.H.G.S.X.
0.5068.00.94Os04g0600400AK072894.1-Conserved hypothetical protein6e-1At2g35470unknown proteinO.I.H.G.S.X.
0.5068.00.96Os06g0608600AK061418.1-Conserved hypothetical protein9e-3At5g56020-O.I.H.G.S.X.
0.4458.10.94Os06g0238900AK106064.1-Protein of unknown function DUF716 family protein2e-1At3g45980HTB9O.I.H.G.S.X.
0.2524.10.94Os05g0279600AK070566.1-Conserved hypothetical protein3e-9At4g30900-O.I.H.G.S.X.
0.1813.70.94Os08g0499200AK120828.1-Cl- channel, voltage gated family protein1e-65At1g55620CLC-F (CHLORIDE CHANNEL F)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
39.199.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.998.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.998.5GSM100446Rice Bala 1ppm Arsenate Rep2GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenateLink to GEO
9.998.0GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM174886F FR13 4 dpi rep 1 with array type rice from AffymetrixGSE7256Identification of rice genes differentially expressed upon virulent infection by Magnaporthe griseaLink to GEO
8.997.8GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.897.6GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1671GO:0006821The directed movement of chloride into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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