CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os06g0295500

Gene name
Homology with Arabidopsis Similar to At5g66815: unknown protein (HF=3e-2)

Module size 6 genes

NF 0.53

%ile 71.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.80 94.6 0.98 Os06g0295500 AK119433.1 - Hypothetical protein 3e-2 At5g66815 unknown protein O.I. H.G. S.X.
0.91 98.9 0.99 Os03g0424200 AK069682.1 - Protein kinase domain containing protein 5e-1 At5g62627 - O.I. H.G. S.X.
0.67 87.2 0.99 Os02g0807200 AK105477.1 - EGF-like calcium-binding domain containing protein 7e-6 At1g48210 serine/threonine protein kinase, putative O.I. H.G. S.X.
0.63 82.7 0.98 Os01g0388500 CF294425 - Conserved hypothetical protein 3e+0 At5g47710 C2 domain-containing protein O.I. H.G. S.X.
0.42 53.9 0.98 Os01g0391500 BI812884 - Conserved hypothetical protein 5e+0 Atmg00270 - O.I. H.G. S.X.
0.23 21.2 0.98 Os01g0930300 AK103050.1 - Conserved hypothetical protein 2e-1 At1g27930 unknown protein O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
31.1 99.7 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
17.8 98.9 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.3 98.9 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.3 98.9 GSM195228 Embryo GSE7951 Genome-wide gene expression profiling of rice stigma
16.0 98.7 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.0 98.6 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.9 98.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.7 98.5 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.4 98.5 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.2 98.4 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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