Co-expression analysis

Gene ID Os06g0283300
Gene name
Homology with ArabidopsisSimilar to At5g15730: serine/threonine protein kinase, putative (HF=1e-4)
Module size 6 genes
NF 0.31
%ile 33.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5676.30.91Os06g02833009634.m01742-Serine/threonine protein kinase family protein1e-4At5g15730serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.4458.10.91Os04g0417800AK067483.1-Peptidase S9A, prolyl oligopeptidase, N-terminalbeta-propeller domain containing protein2e-5At3g15470WD-40 repeat family proteinO.I.H.G.S.X.
0.4051.10.92Os01g0695200AK064145.1-Conserved hypothetical protein9e-7At5g14550unknown proteinO.I.H.G.S.X.
0.2219.40.91Os11g0160500AY224425.1-BZIP-like protein8e-11At1g43700VIP1 (VIRE2-INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.1915.10.92Os01g0919500AK059108.1-Zn-finger, RING domain containing protein2e+0At2g01260unknown proteinO.I.H.G.S.X.
0.1510.30.92Os03g0138000AK069986.1-TPR-like domain containing protein2e-2At3g26180CYP71B20O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
28.799.6GSM262020Nipponbare, 11 days after infection with S. hermonthica, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthicaLink to GEO
21.399.2GSM262021Nipponbare, 11 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthicaLink to GEO
11.098.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.997.8GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.897.6GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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