Co-expression analysis

Gene ID Os06g0264900
Gene name
Homology with ArabidopsisSimilar to At1g73875: endonuclease/exonuclease/phosphatase family protein (HF=4e-1)
Module size 6 genes
NF 0.14
%ile 11.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.60.93Os06g02649009634.m01544-Endonuclease/exonuclease/phosphatase familyprotein4e-1At1g73875endonuclease/exonuclease/phosphatase family proteinO.I.H.G.S.X.
0.3644.00.94Os03g05932009631.m03811-Protein of unknown function DUF21 domaincontaining protein4e-46At1g55930CBS domain-containing protein / transporter associated domain-containing proteinO.I.H.G.S.X.
0.3541.70.94Os04g0349600AK070947.1-TPR-like domain containing protein2e-2At3g19160ATIPT8 (ATP/ADP ISOPENTENYLTRANSFERASES)O.I.H.G.S.X.
0.3338.80.94Os11g0265900AK066020.1-Disease resistance protein family protein5e-1At5g40570surfeit locus protein 2 family protein / SURF2 family proteinO.I.H.G.S.X.
0.138.20.93Os08g0215200AK072536.1-En/Spm-like transposon proteins family protein1e-1At1g10950endomembrane protein 70, putativeO.I.H.G.S.X.
0.042.00.93Os09g0383400AK103385.1-Helicase, C-terminal domain containing protein9e-5At1g59990DEAD/DEAH box helicase, putative (RH22)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.998.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.098.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.298.3GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.798.1GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377079Genomic DNA - 45 day old leaf sample - mutant g6686GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.94795.1.A1_at, orthologous to the query gene, Os06g0264900

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9399.5PtpAffx.94795.1.A1_atAt1g73875--3e-1At5g27606unknown proteinO.I.H.G.S.X.
0.3661.6Ptp.5996.1.S1_atAt1g73875hypothetical protein-6e-3At1g13060PBE1O.I.H.G.S.X.
0.3357.5PtpAffx.211731.1.S1_atAt1g73875hypothetical protein-5e-123At4g02120CTP synthase, putative / UTP--ammonia ligase, putativeO.I.H.G.S.X.
0.2950.5PtpAffx.82861.1.A1_atAt1g73875--7e-40At2g27040AGO4 (ARGONAUTE 4)O.I.H.G.S.X.
0.2747.1PtpAffx.147467.1.A1_atAt1g73875hypothetical protein-8e-77At2g38730peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putativeO.I.H.G.S.X.
0.2543.6PtpAffx.159716.1.A1_atAt1g73875hypothetical protein-2e-24At5g63960EMB2780 (EMBRYO DEFECTIVE 2780)O.I.H.G.S.X.
0.2340.5PtpAffx.160131.1.A1_atAt1g73875--4e+0At1g34095unknown proteinO.I.H.G.S.X.
0.2340.5PtpAffx.10406.1.A1_atAt1g73875hypothetical protein-4e-1At4g28910-O.I.H.G.S.X.
0.2238.3PtpAffx.6826.3.S1_a_atAt1g73875--3e-17At2g33840tRNA synthetase class I (W and Y) family proteinO.I.H.G.S.X.
0.2238.3PtpAffx.11670.1.S1_a_atAt1g73875hypothetical protein-2e-21At1g20540transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2034.6PtpAffx.208811.1.S1_s_atAt1g73875hypothetical protein-8e-4At5g51080RNase H domain-containing proteinO.I.H.G.S.X.
0.1219.6PtpAffx.21853.1.S1_a_atAt1g73875histone deacetylase-1e+0At3g50980XERO1 (DEHYDRIN XERO 1)O.I.H.G.S.X.
0.0914.6PtpAffx.249.606.A1_a_atAt1g73875hypothetical protein-1e-25At1g63260TET10 (TETRASPANIN10)O.I.H.G.S.X.
0.0711.6PtpAffx.159822.1.A1_atAt1g73875--8e-1At1g64480CBL8 (CALCINEURIN B-LIKE PROTEIN 8)O.I.H.G.S.X.
0.0711.6PtpAffx.8468.1.S1_atAt1g73875--8e-59At3g17465RPL3P (RIBOSOMAL PROTEIN L3 PLASTID)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage