CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os06g0247800

Gene name
Homology with Arabidopsis Similar to At1g10290: ADL6 (DYNAMIN-LIKE PROTEIN 6) (HF=2e-30)

Module size 9 genes

NF 0.55

%ile 74.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.61 81.2 0.97 Os06g0247800 AK102187.1 - Dynamin-like protein (Fragment) 2e-30 At1g10290 ADL6 (DYNAMIN-LIKE PROTEIN 6) O.I. H.G. S.X.
0.67 87.2 0.98 Os03g0395600 AK063311.1 - Hypothetical protein 4e-1 At1g30260 - O.I. H.G. S.X.
0.63 82.7 0.98 Os11g0661400 AK063910.1 - AAA ATPase, central region domain containingprotein 9e-37 At1g02890 AAA-type ATPase family protein O.I. H.G. S.X.
0.54 71.9 0.97 Os07g0497000 AK100332.1 - Chromodomain helicase-DNA-binding protein Mi-2homolog (dMi-2) 2e-48 At5g44800 CHR4 (CHROMATIN REMODELING 4) O.I. H.G. S.X.
0.53 71.3 0.97 Os07g0511900 AK060218.1 - Conserved hypothetical protein 2e-1 At5g20620 UBQ4 O.I. H.G. S.X.
0.50 68.0 0.97 Os03g0213300 AK058608.1 - Hypothetical protein 7e-1 At1g47495 unknown protein O.I. H.G. S.X.
0.46 60.9 0.98 Os12g0102400 AK103750.1 - RNA-binding region RNP-1 (RNA recognition motif)domain containing protein 6e-16 At3g45630 RNA recognition motif (RRM)-containing protein O.I. H.G. S.X.
0.44 58.1 0.98 Os03g0750800 AK061386.1 - Transcriptional adaptor ADA2b (AT4g16420/dl4235c) 9e-11 At4g16420 ADA2B (HOMOLOG OF YEAST ADA2 2B) O.I. H.G. S.X.
0.41 52.4 0.97 Os09g0281600 AK067020.1 - SWAP/Surp domain containing protein 6e-12 At3g52120 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.1 99.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
11.2 98.2 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.1 98.0 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.9 98.0 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.7 98.0 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.6 97.9 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.0 97.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.9 97.8 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.6 97.8 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.6 97.8 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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