Co-expression analysis

Gene ID Os06g0187200
Gene name
Homology with ArabidopsisSimilar to At1g02000: GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2) (HF=1e-14)
Module size 6 genes
NF 0.38
%ile 45.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.97Os06g0187200AK106963.1-Nucleotide sugar epimerase-like protein(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)1e-14At1g02000GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2)O.I.H.G.S.X.
0.8395.80.97Os01g0817400NM_191084.1-Conserved hypothetical protein6e+0At5g37060ATCHX24O.I.H.G.S.X.
0.6079.70.97Os12g0640500AK070701.1-Na+/H+ antiporter-like protein2e+0At5g5729060S acidic ribosomal protein P3 (RPP3B)O.I.H.G.S.X.
0.5573.70.97Os11g0195700AK111008.1-Hypothetical protein7e-3At1g25425CLE43 (CLAVATA3/ESR-RELATED 43)O.I.H.G.S.X.
0.2321.20.97Os07g0191600AK102563.1-Conserved hypothetical protein2e+0At1g69890-O.I.H.G.S.X.
0.094.90.97Os08g02142669636.m01112--3e-1At5g11680unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.199.7GSM302915emb6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
27.699.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.599.1GSM302914emb6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
18.999.0GSM195228EmbryoGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
4.796.4GSM4094339311_young panicle 2cm, biological rep4GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChipLink to GEO
4.496.2GSM4094309311_young panicle 2cm, biological rep1GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChipLink to GEO
4.296.0GSM4094319311_young panicle 2cm, biological rep2GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChipLink to GEO
4.196.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.995.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.495.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0801GO:0009225The chemical reactions and pathways involving nucleotide-sugars, any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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