Co-expression analysis

Gene ID Os06g0180501
Gene name
Homology with ArabidopsisSimilar to At3g49580: LSU1 (RESPONSE TO LOW SULFUR 1) (HF=3e+0)
Module size 10 genes
NF 0.45
%ile 57.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5068.00.97Os06g01805019634.m00759--3e+0At3g49580LSU1 (RESPONSE TO LOW SULFUR 1)O.I.H.G.S.X.
0.5371.30.98Os02g01292009630.m00270--9e+0At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)O.I.H.G.S.X.
0.5269.60.98Os10g01460009638.m00471--5e-1At2g01755unknown proteinO.I.H.G.S.X.
0.5269.60.98Os10g0479800AK107572.1-Protein of unknown function DUF1336 domaincontaining protein6e-25At2g28320pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing proteinO.I.H.G.S.X.
0.4660.90.98Os12g0165300AK120817.1-Hypothetical protein1e+0At5g60490FLA12O.I.H.G.S.X.
0.3948.30.98Os11g01251009639.m00225--1e-2At5g42780AtHB27 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 27)O.I.H.G.S.X.
0.3948.30.98Os04g05834009632.m04794--2e+0At3g29034unknown proteinO.I.H.G.S.X.
0.3948.30.97Os07g0132200NM_186234.1--9e-1At5g51170unknown proteinO.I.H.G.S.X.
0.3541.70.98Os02g01101009630.m00098--5e-1At4g34590GBF6 (G-BOX BINDING FACTOR 6)O.I.H.G.S.X.
0.3236.30.97Os04g03965009632.m03101--1e-1At3g46930protein kinase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.399.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.398.2GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.798.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.798.1GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM159199Inflorescence (P4, 10 - 15 cm), biological rep 2GSE6893Expression data for reproductive development in riceLink to GEO
10.698.1GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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