Co-expression analysis

Gene ID Os06g0175400
Gene name
Homology with ArabidopsisSimilar to At4g39260: GR-RBP8 (HF=6e-1)
Module size 6 genes
NF 0.59
%ile 79.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.98Os06g0175400NM_185681.1-BSD domain containing protein6e-1At4g39260GR-RBP8O.I.H.G.S.X.
0.6787.20.98Os02g05292669630.m03103--4e+0Atmg00680-O.I.H.G.S.X.
0.6181.20.99Os10g0552000NM_197673.1--2e+0At5g45573unknown proteinO.I.H.G.S.X.
0.5573.70.99Os10g0166500NM_195023.1-En/Spm-like transposon proteins family protein8e+0At5g0950040S ribosomal protein S15 (RPS15C)O.I.H.G.S.X.
0.5068.00.99Os11g04957009639.m02731-FAD linked oxidase, N-terminal domain containingprotein1e+0At5g11520ASP3 (ASPARTATE AMINOTRANSFERASE 3)O.I.H.G.S.X.
0.3644.00.98Os04g0597700AK105711.1-Conserved hypothetical protein1e-3At2g02040PTR2 (PEPTIDE TRANSPORTER 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
48.899.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
42.299.9GSM159272Rice coleoptiles, 4 days old, anoxic, REPLICATE 2 (Sample #12)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice ColeoptileLink to GEO
32.399.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
29.399.7GSM159271Rice coleoptiles, 4 days old, anoxic, REPLICATE 1 (Sample #11)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice ColeoptileLink to GEO
11.898.3GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.798.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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