Co-expression analysis

Gene ID Os06g0168800
Gene name
Homology with ArabidopsisSimilar to At5g15080: protein kinase, putative (HF=3e-22)
Module size 6 genes
NF 0.14
%ile 11.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.60.93Os06g0168800AK111753.1-Protein kinase3e-22At5g15080protein kinase, putativeO.I.H.G.S.X.
0.4051.10.93Os05g0475300AK065069.1-VHS domain containing protein1e-6At5g01760VHS domain-containing protein / GAT domain-containing proteinO.I.H.G.S.X.
0.3338.80.93Os01g0259200AK067283.1-Protein kinase domain containing protein2e-12At5g18610protein kinase family proteinO.I.H.G.S.X.
0.2524.10.93Os11g0113300BX898462-Conserved hypothetical protein5e-1At4g20470unknown proteinO.I.H.G.S.X.
0.1510.30.94Os03g0318600AB051294.1-Transcription factor HBP-1b(c38)4e-15At5g06950AHBP-1BO.I.H.G.S.X.
0.042.00.94Os01g0780500AF225922.1-SCAMP family protein1e-14At2g20840secretory carrier membrane protein (SCAMP) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.998.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.798.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.898.0GSM431928Root- -Fe+P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlingsLink to GEO
9.898.0GSM195228EmbryoGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
9.597.9GSM431927Root- -Fe+P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlingsLink to GEO
6.697.3GSM302915emb6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
6.597.2GSM302914emb6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
6.297.1GSM154829Root_DMSO-treatment_30min_replicate 1GSE6719Cytokinin responsive genes in riceLink to GEO
6.297.1GSM67057FL478 salt stressed replicate 3GSE3053Rice salt expressionLink to GEO
6.197.1GSM154831Root_DMSO-treatment_30min_replicate 2GSE6719Cytokinin responsive genes in riceLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1541GO:0006891The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).Link to AmiGO
0.0291GO:0015031The directed movement of proteins into, out of, within or between cells.Link to AmiGO
0.0201GO:0006886The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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