Co-expression analysis

Gene ID Os06g0165300
Gene name
Homology with ArabidopsisSimilar to At3g01500: CA1 (CARBONIC ANHYDRASE 1) (HF=2e-4)
Module size 6 genes
NF 0.47
%ile 60.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4458.10.97Os06g01653009634.m00627-Hypothetical protein2e-4At3g01500CA1 (CARBONIC ANHYDRASE 1)O.I.H.G.S.X.
0.7391.10.98Os02g0121900AK109567.1-TPR-like domain containing protein3e-1At2g44840ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)O.I.H.G.S.X.
0.6181.20.98Os02g05458009630.m03243--6e+0At5g50510-O.I.H.G.S.X.
0.3846.90.98Os12g06029009640.m04010--9e+0Atmg00890-O.I.H.G.S.X.
0.3541.70.98Os01g08024009640.m01501-Conserved hypothetical protein8e-1At5g26110ATP binding / catalytic/ protein kinaseO.I.H.G.S.X.
0.2727.50.98Os05g01260509633.m00277--1e-2At5g47090unknown proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5068.00.97Os08g03721009636.m02817--1e+1Atmg01310-O.I.H.G.S.X.
0.4863.70.98Os05g0468200AK105507.1-Conserved hypothetical protein3e+0At5g55610unknown proteinO.I.H.G.S.X.
0.4660.90.94Os07g02918009635.m01929-Cytochrome P4508e-2At3g48320CYP71A21O.I.H.G.S.X.
0.4660.90.95Os04g0552700AK121993.1-Zn-finger, C2H2 type domain containing protein3e-3At5g43170AZF3 (ARABIDOPSIS ZINC-FINGER PROTEIN 3)O.I.H.G.S.X.
0.4458.10.96Os07g0107000CB966080-Conserved hypothetical protein2e+0At5g07600oleosin / glycine-rich proteinO.I.H.G.S.X.
0.4051.10.96Os04g01800019632.m00881--9e-1At2g25605unknown proteinO.I.H.G.S.X.
0.4051.10.97Os11g06397009639.m03869--4e-2At5g33370GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.4051.10.97Os11g05810009639.m03358--1e-1At2g40240pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.3644.00.97Os03g0734400CB966465-Ribosomal protein L7/L12 family protein2e+0At1g02710glycine-rich proteinO.I.H.G.S.X.
0.3541.70.97Os02g06512009630.m04184-Conserved hypothetical protein5e+0At5g28630glycine-rich proteinO.I.H.G.S.X.
0.3440.00.96Os01g03479009629.m02377--9e-1At5g43680unknown proteinO.I.H.G.S.X.
0.3338.80.91Os10g03827009638.m02015--7e+0At5g59613unknown proteinO.I.H.G.S.X.
0.3134.50.98Os05g03837009633.m02911--7e-1At4g30050unknown proteinO.I.H.G.S.X.
0.2831.10.97Os09g03519009637.m01570--6e-1At5g62440-O.I.H.G.S.X.
0.2727.50.96Os04g01046009632.m00044--3e+0At5g42635glycine-rich proteinO.I.H.G.S.X.
0.2625.60.97Os11g02108009639.m00995--3e-1At1g23600unknown proteinO.I.H.G.S.X.
0.2625.60.97Os11g0302900AK065382.1-The start codon is not identified.6e-2At1g35183unknown proteinO.I.H.G.S.X.
0.2524.10.93Os02g07852009630.m05393--2e+0At3g45540zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2524.10.95Os12g0140700AK108475.1-Zn-finger, RING domain containing protein3e+0At3g49860ATARLA1B (ADP-ribosylation factor-like A1B)O.I.H.G.S.X.
0.2524.10.97Os08g05269009636.m04217--3e-1At5g12340unknown proteinO.I.H.G.S.X.
0.2524.10.97Os06g0562700AK109753.1-Conserved hypothetical protein3e+0At5g5144023.5 kDa mitochondrial small heat shock protein (HSP23.5-M)O.I.H.G.S.X.
0.2524.10.97Os04g01617019632.m00709--2e-1At2g47485unknown proteinO.I.H.G.S.X.
0.2524.10.97Os09g02575009637.m00607--4e+0Atmg00770-O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.798.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.598.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.098.5GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.798.5GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.698.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.698.5GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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