Co-expression analysis

Gene ID Os06g0165300
Gene name
Homology with ArabidopsisSimilar to At3g01500: CA1 (CARBONIC ANHYDRASE 1) (HF=2e-4)
Module size 6 genes
NF 0.47
%ile 60.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4458.10.97Os06g01653009634.m00627-Hypothetical protein2e-4At3g01500CA1 (CARBONIC ANHYDRASE 1)O.I.H.G.S.X.
0.7391.10.98Os02g0121900AK109567.1-TPR-like domain containing protein3e-1At2g44840ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)O.I.H.G.S.X.
0.6181.20.98Os02g05458009630.m03243--6e+0At5g50510-O.I.H.G.S.X.
0.3846.90.98Os12g06029009640.m04010--9e+0Atmg00890-O.I.H.G.S.X.
0.3541.70.98Os01g08024009640.m01501-Conserved hypothetical protein8e-1At5g26110ATP binding / catalytic/ protein kinaseO.I.H.G.S.X.
0.2727.50.98Os05g01260509633.m00277--1e-2At5g47090unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.798.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.598.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.098.5GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.798.5GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.698.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.698.5GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.9477.1.S1_at, orthologous to the query gene, Os06g0165300

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.2TaAffx.9477.1.S1_atAt3g01500--3e-1At3g53970proteasome inhibitor-relatedO.I.H.G.S.X.
0.1719.8Ta.7295.3.S1_x_atAt3g01500--4e-3At2g23420NAPRT2 (NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2)O.I.H.G.S.X.
0.1719.8Ta.6062.3.S1_atAt3g01500--1e-3At4g24590unknown proteinO.I.H.G.S.X.
0.0910.4TaAffx.38268.1.A1_atAt3g01500--1e+0At1g21326VQ motif-containing proteinO.I.H.G.S.X.
0.078.6TaAffx.57555.1.S1_atAt3g01500--2e+1At5g67600unknown proteinO.I.H.G.S.X.
0.012.4Ta.12360.1.A1_atAt3g01500--4e+0At1g70220unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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