Co-expression analysis

Gene ID Os06g0163000
Gene name
Homology with ArabidopsisSimilar to At1g01660: U-box domain-containing protein (HF=1e-3)
Module size 13 genes
NF 0.33
%ile 36.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6079.70.91Os06g0163000AK072504.1-Heat shock protein STI (Stress inducible protein)(GmSTI)1e-3At1g01660U-box domain-containing proteinO.I.H.G.S.X.
0.5269.60.95Os04g0501200AK069193.1-Conserved hypothetical protein6e-5At5g57970methyladenine glycosylase family proteinO.I.H.G.S.X.
0.4863.70.94Os05g01434009633.m00447-Eukaryotic protein of unknown function DUF873family protein5e-3At5g49010SLD5 (SYNTHETIC LETHALITY WITH DPB11-1 5)O.I.H.G.S.X.
0.3948.30.92Os10g0358600AK068930.1-Conserved hypothetical protein1e-17At1g19330unknown proteinO.I.H.G.S.X.
0.3948.30.94Os02g0773400AK100497.1-Ion transport protein family protein4e-10At3g17700CNBT1 (CYCLIC NUCLEOTIDE-BINDING TRANSPORTER 1)O.I.H.G.S.X.
0.3644.00.92Os06g0679500AK063283.1--2e-17At1g05170galactosyltransferase family proteinO.I.H.G.S.X.
0.3236.30.93Os02g01743009630.m00732-Homeodomain-like containing protein2e-1At1g53240malate dehydrogenase (NAD), mitochondrialO.I.H.G.S.X.
0.2831.10.95Os04g0117200AK107523.1-Spectrin repeat containing protein9e-1At1g03130PSAD-2 (photosystem I subunit D-2)O.I.H.G.S.X.
0.2727.50.94Os01g0647700AK100691.1-Epoxide hydrolase family protein2e-5At1g80280hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.2625.60.94Os01g0617700AK073890.1-Hypothetical protein9e-2At2g04025unknown proteinO.I.H.G.S.X.
0.2422.40.92Os01g0728200AK060469.1-Hypothetical protein1e-1At5g38710proline oxidase, putative / osmotic stress-responsive proline dehydrogenase, putativeO.I.H.G.S.X.
0.1712.60.94Os11g0175500AK101592.1-Zn-finger, RING domain containing protein2e-1At1g47570zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1611.30.93Os09g0320400BX901415-Xanthine/uracil/vitamin C permease family protein4e+0At3g43720protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.399.4GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
14.298.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.698.1GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0711GO:0006811The directed movement of charged atoms or small charged molecules into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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