Co-expression analysis

Gene ID Os06g0103900
Gene name
Homology with ArabidopsisSimilar to At4g10440: dehydration-responsive family protein (HF=3e-10)
Module size 6 genes
NF 0.47
%ile 60.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5573.70.96Os06g0103900AK111870.1-Putative methyltransferase DUF248 family protein3e-10At4g10440dehydration-responsive family proteinO.I.H.G.S.X.
0.5068.00.96Os04g0628400AK066646.1-BED finger domain containing protein4e-1At5g25310catalyticO.I.H.G.S.X.
0.4458.10.96Os10g0181700AK058820.1-ATP-binding region, ATPase-like domain containingprotein2e+0At5g46980invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.4253.90.96Os10g0546200CA759033-Conserved hypothetical protein2e-3At5g04480-O.I.H.G.S.X.
0.4051.10.96Os02g0523300AK121782.1-Spc97/Spc98 family protein1e-4At1g80260emb1427 (embryo defective 1427)O.I.H.G.S.X.
0.3541.70.96Os03g0423800AK069431.1-Conserved hypothetical protein3e-1At2g03070unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.499.0GSM195220stigma 3, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
17.898.9GSM195219stigma 2, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
16.698.8GSM195218stigma 1, biological rep1GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
14.098.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.098.0GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.797.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.597.2GSM100443Rice Bala 0ppm Arsenate (Control) Rep1GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenateLink to GEO
6.297.1GSM195222Ovary 2, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2501GO:0000226A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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