Co-expression analysis

Gene ID Os05g0587300
Gene name
Homology with ArabidopsisSimilar to At1g53300: TTL1 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 1) (HF=4e-1)
Module size 6 genes
NF 0.08
%ile 5.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7391.10.90Os05g0587300AK120811.1-Protein prenyltransferase domain containingprotein4e-1At1g53300TTL1 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 1)O.I.H.G.S.X.
0.2931.10.93Os01g0236000AK065569.1-Hypothetical protein2e+0At5g20650COPT5O.I.H.G.S.X.
0.1813.70.91Os06g0589600AK111758.1-Protein kinase domain containing protein7e-1At5g23600tRNA 2'phosphotransferase, putativeO.I.H.G.S.X.
0.063.00.90Os04g0619300AK065137.1-Cyclin-like F-box domain containing protein3e-4At1g26930kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.031.40.93Os08g0386700AK069501.1-Beta 1,3-glycosyltransferase-like protein I2e-7At5g53340galactosyltransferase family proteinO.I.H.G.S.X.
0.031.40.93Os06g0687400AK072400.1-Hypothetical plant protein family protein2e-30At3g26370unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
35.799.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.198.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.197.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.897.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.697.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.597.2GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.997.0GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0711GO:0006486The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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