Co-expression analysis

Gene ID Os05g0586500
Gene name
Homology with ArabidopsisSimilar to At5g41800: amino acid transporter family protein (HF=9e-7)
Module size 18 genes
NF 0.49
%ile 65.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5978.00.84Os05g0586500AK106883.1-Amino acid/polyamine transporter II family protein9e-7At5g41800amino acid transporter family proteinO.I.H.G.S.X.
0.7189.60.89Os12g01832009640.m00762-3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)(3'(2'),5- bisphosphonucleoside 3'(2')-phosphohydrolase)(DPNPase)3e-2At5g639903'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putativeO.I.H.G.S.X.
0.6583.80.90Os01g0678800AK062840.1-Heavy metal transport/detoxification proteindomain containing protein3e-1At1g20220nucleic acid bindingO.I.H.G.S.X.
0.5877.00.87Os02g08208009630.m05730-Protein of unknown function DUF296 domaincontaining protein3e-2At4g14465DNA-binding protein-relatedO.I.H.G.S.X.
0.5777.00.88Os05g0596500AK070817.1-Zn-finger, RING domain containing protein7e-1At5g63480unknown proteinO.I.H.G.S.X.
0.5471.90.89Os12g0639200AK122160.1-AAA ATPase, central region domain containingprotein4e-3At4g05380AAA-type ATPase family proteinO.I.H.G.S.X.
0.4964.40.88Os07g0421300AK121014.1-Glycoside hydrolase, family 31 protein7e-15At3g23640HGL1 (heteroglycan glucosidase 1)O.I.H.G.S.X.
0.4964.40.88Os08g01087009636.m00070-Conserved hypothetical protein9e-2At3g21260glycolipid transfer protein-relatedO.I.H.G.S.X.
0.4863.70.89Os05g0489900AK070533.1-Calcium/calmodulin-dependent protein kinase2e-5At4g09570CPK4O.I.H.G.S.X.
0.4458.10.88Os06g0692100AK110293.1-Protein kinase domain containing protein1e-1At1g48480RKL1O.I.H.G.S.X.
0.4458.10.88Os02g0579600AY177696.1-Transcription factor MADS277e-19At3g57230AGL16 (AGAMOUS-LIKE 16)O.I.H.G.S.X.
0.4458.10.89Os10g0390600AK107029.1-1-aminocyclopropane-1-carboxylate synthase familyprotein4e-7At1g72330ALAAT2 (ALANINE AMINOTRANSFERASE 2)O.I.H.G.S.X.
0.4051.10.91Os09g0280500AK106988.1-Basic-leucine zipper (bZIP) transcription factordomain containing protein7e-2At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)O.I.H.G.S.X.
0.4051.10.91Os07g01930009635.m00915-HIPL1 protein precursor3e-1At5g62630HIPL2 (HIPL2 PROTEIN PRECURSOR)O.I.H.G.S.X.
0.3948.30.89Os10g0193100CA755860-Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein1e+0At2g22800HAT9O.I.H.G.S.X.
0.3644.00.87Os04g0162500AK108645.1-The start codon is not identified.9e-3At2g28200nucleic acid binding / transcription factor/ zinc ion bindingO.I.H.G.S.X.
0.3541.70.88Os06g0695800AK109450.1-ABC transporter related domain containing protein1e+1At5g60400unknown proteinO.I.H.G.S.X.
0.3541.70.88Os02g0108800AK099951.1-Conserved hypothetical protein5e-2At1g04555unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.698.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.598.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.698.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0331GO:0006865The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells.Link to AmiGO
0.0181GO:0006310Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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