Co-expression analysis

Gene ID Os05g0584900
Gene name
Homology with ArabidopsisSimilar to At5g24030: SLAH3 (SLAC1 HOMOLOGUE 3) (HF=5e-3)
Module size 6 genes
NF 0.01
%ile 0.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.95Os05g0584900AK105309.1-Conserved hypothetical protein5e-3At5g24030SLAH3 (SLAC1 HOMOLOGUE 3)O.I.H.G.S.X.
0.1510.30.96Os11g04261009639.m02101--2e-2At3g29280unknown proteinO.I.H.G.S.X.
0.116.50.98Os01g0939700AK110726.1-Esterase D (EC 3.1.1.1)7e-3At2g41530SFGH (S-FORMYLGLUTATHIONE HYDROLASE)O.I.H.G.S.X.
0.052.50.99Os10g0482500NM_197048.1--1e+0At4g38410dehydrin, putativeO.I.H.G.S.X.
0.031.40.98Os05g0119900AU092766-Conserved hypothetical protein5e+0At1g12750ATRBL6 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 6)O.I.H.G.S.X.
-0.10.96Os02g0441000AK108073.1-Hypothetical protein2e-2At3g62090PIL2 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
61.099.9GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
7.397.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.197.4GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.697.3GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.597.2GSM377083Genomic DNA - 45 day old leaf sample - mutant g6989GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.097.0GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.997.0GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.796.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the barley gene, HI01L19w_at, orthologous to the query gene, Os05g0584900

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7388.7HI01L19w_atAt5g24030--4e+0At4g33360terpene cyclase/mutase-relatedO.I.H.G.S.X.
0.6480.9HT12N15u_atAt5g24030--3e-1At3g46030HTB11O.I.H.G.S.X.
0.5774.9Contig14606_atAt5g24030--8e-2At1g08450CRT3 (CALRETICULIN 3)O.I.H.G.S.X.
0.5369.7Contig2456_atAt5g24030--7e+0At3g06019unknown proteinO.I.H.G.S.X.
0.5268.3HU07N04r_atAt5g24030--1e+0At4g11870unknown proteinO.I.H.G.S.X.
0.5066.9HT11K03r_atAt5g24030--5e+0At1g23530unknown proteinO.I.H.G.S.X.
0.4863.2Contig24241_atAt5g24030--9e+0At5g54215-O.I.H.G.S.X.
0.2732.1HT14G19r_atAt5g24030--4e+0At2g24395chaperone protein dnaJ-relatedO.I.H.G.S.X.
0.2122.6HVSMEa0001E11r2_atAt5g24030--3e+0At1g75180unknown proteinO.I.H.G.S.X.
0.119.4Contig26553_atAt5g24030--8e+0At5g66160JR700O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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