Co-expression analysis

Gene ID Os05g0582300
Gene name
Homology with ArabidopsisSimilar to At1g17050: SPS2 (Solanesyl diphosphate synthase 2) (HF=2e-17)
Module size 6 genes
NF 0.63
%ile 86.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4458.10.95Os05g0582300AK101790.1-Solanesyl diphosphate synthase2e-17At1g17050SPS2 (Solanesyl diphosphate synthase 2)O.I.H.G.S.X.
0.8395.80.96Os08g0432500AK106170.1-ATP-dependent Clp protease adaptor protein ClpSfamily protein3e-2At3g61678unknown proteinO.I.H.G.S.X.
0.8094.60.97Os03g0744700AK071178.1-Conserved hypothetical protein4e-2At1g62250unknown proteinO.I.H.G.S.X.
0.7391.10.96Os11g0603200AK059060.1-ABCF-type protein1e-19At5g64840ATGCN5 (A. THALIANA GENERAL CONTROL NON-REPRESSIBLE 5)O.I.H.G.S.X.
0.5777.00.96Os04g0657300CB624212-Farnesyl pyrophosphate synthetase 2 (FPPsynthetase 2) (FPS 2) (Farnesyl diphosphate synthetase 2)[Includes: Dimethylallyltranstransferase (EC 2.5.1.1)2e-1At1g68552CPuORF53 (Conserved peptide upstream open reading frame 53)O.I.H.G.S.X.
0.4458.10.96Os07g0656700AU173917-Protein of unknown function DUF1334 family protein4e-11At5g13720-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
36.399.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
33.499.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.499.1GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.098.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1251GO:0008299The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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