Co-expression analysis

Gene ID Os05g0569500
Gene name
Homology with ArabidopsisSimilar to At1g05510: - (HF=6e-10)
Module size 6 genes
NF 0.85
%ile 99.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.97Os05g0569500AF049892.1--6e-10At1g05510-O.I.H.G.S.X.
0.8395.80.97Os05g0140800AK110652.1-Glucose/ribitol dehydrogenase family protein7e-1At3g05260short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.8395.80.97Os03g0277500AK063650.1-Glyoxalase/bleomycin resistanceprotein/dioxygenase domain containing protein2e+1At4g38260unknown proteinO.I.H.G.S.X.
0.7391.10.97Os01g0702500AY333185.1-Dehydrin RAB253e-5At3g50980XERO1 (DEHYDRIN XERO 1)O.I.H.G.S.X.
0.7391.10.97Os04g0510900AK063625.1-Embryo-specific protein 1 (ATS1)9e+0At1g23240caleosin-related family proteinO.I.H.G.S.X.
0.6079.70.97Os03g0159600AK106743.1-Rab28 protein1e+1At3g14200DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9299.10.95Os06g0324400AK063726.1-Late embryogenesis abundant (LEA) group 1 familyprotein1e+0At5g49600unknown proteinO.I.H.G.S.X.
0.8094.60.96Os01g03033009629.m01932-Mitochondrial import inner membrane translocase,subunit Tim17/22 family protein5e-1At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)O.I.H.G.S.X.
0.7391.10.93Os03g0381500AK108125.1-Hypothetical protein4e-1At3g19150KRP6 (KIP-RELATED PROTEIN 6)O.I.H.G.S.X.
0.6787.20.93Os02g0644000AB081464.1-C13 endopeptidase NP1 (Fragment)2e-23At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)O.I.H.G.S.X.
0.6787.20.95Os08g0127900U25968.1-Globulin 1 (Fragment)4e+0At3g55790unknown proteinO.I.H.G.S.X.
0.6382.70.90Os01g0225600AK063645.1-Late embryogenesis abundant protein Lea14-A4e-1At1g01470LEA14 (LATE EMBRYOGENESIS ABUNDANT 14)O.I.H.G.S.X.
0.6079.70.91Os09g0109600AK063582.1-Conserved hypothetical protein1e+0At3g57500unknown proteinO.I.H.G.S.X.
0.5573.70.87Os07g0422100U57639.1-AWPM-19-like family protein5e-1At4g05070unknown proteinO.I.H.G.S.X.
0.5371.30.93Os03g0197300AK102651.1-RmlC-like cupin family protein7e-2At5g37200zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5068.00.92Os03g0168100AK121575.1-Late embryogenesis abundant protein repeatcontaining protein1e-2At1g12665-O.I.H.G.S.X.
0.4863.70.92Os05g0349800AK063677.1-Embryonic abundant protein 17e-3At3g51810EM1 (LATE EMBRYOGENESIS ABUNDANT 1)O.I.H.G.S.X.
0.4660.90.87Os08g0104400AK064224.1-Conserved hypothetical protein2e-2At3g12960unknown proteinO.I.H.G.S.X.
0.4660.90.92Os09g0127700AK107885.1-Conserved hypothetical protein1e+0At4g11660AT-HSFB2BO.I.H.G.S.X.
0.4458.10.93Os03g0842900AK107425.1-Short-chain dehydrogenase/reductase SDR familyprotein3e-3At3g47350short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.4355.40.91Os09g0433900AK107237.1-Alanine aminotransferase4e-3At1g72330ALAAT2 (ALANINE AMINOTRANSFERASE 2)O.I.H.G.S.X.
0.4253.90.88Os09g0479800AK109585.1-Phosphofructokinase family protein3e+0At5g47810PFK2 (PHOSPHOFRUCTOKINASE 2)O.I.H.G.S.X.
0.4253.90.91Os11g0582400AF516927.1-Hypothetical protein2e-1At5g25020unknown proteinO.I.H.G.S.X.
0.4253.90.91Os08g0327700AK107930.1-Late embryogenesis abundant (LEA) group 1 familyprotein2e+0At3g15340PPI2 (proton pump interactor 2)O.I.H.G.S.X.
0.4051.10.87Os05g0474600AK059249.1-Aldose reductase (EC 1.1.1.21) (AR) (Aldehydereductase)4e-17At3g56140unknown proteinO.I.H.G.S.X.
0.4051.10.87Os06g0110200AK107973.1-Late embryogenesis abundant (LEA) group 1 familyprotein1e+0At4g11250AGL52O.I.H.G.S.X.
0.4051.10.89Os10g0548100AK107224.1-Conserved hypothetical protein6e-1At2g11005glycine-rich proteinO.I.H.G.S.X.
0.3846.90.94Os03g0663800AK105347.1--8e-3At1g58420-O.I.H.G.S.X.
0.3846.90.88Os07g0480900AK063422.1-Cysteine protease (Fragment)8e-7At4g39090RD19 (RESPONSIVE TO DEHYDRATION 19)O.I.H.G.S.X.
0.3644.00.84Os03g0693700AK103716.1-Oxalate oxidase 1 (EC 1.2.3.4) (Germin)8e+0At3g10080germin-like protein, putativeO.I.H.G.S.X.
0.3644.00.90Os09g0256700AK119936.1-Conserved hypothetical protein3e-1At4g17650aromatic-rich family proteinO.I.H.G.S.X.
0.3541.70.89Os05g0576700AK063599.1-Oleosin family protein9e-2At1g22640MYB3 (MYB DOMAIN PROTEIN 3)O.I.H.G.S.X.
0.3338.80.87Os03g0305600AK063714.1-Mitochondrial import inner membrane translocase,subunit Tim17/22 family protein2e+0At1g22300GRF10 (GENERAL REGULATORY FACTOR 10)O.I.H.G.S.X.
0.3236.30.87Os08g0467500AK064041.1-Abscisic acid and stress inducible (A22) gene1e+0At3g26460major latex protein-related / MLP-relatedO.I.H.G.S.X.
0.3236.30.82Os05g0247800AK073843.1-Glycoside hydrolase, family 18 protein2e+0At1g64628CPuORF57 (Conserved peptide upstream open reading frame 57)O.I.H.G.S.X.
0.3236.30.88Os04g0434400AK063725.1-Hypothetical protein7e-1At5g42635glycine-rich proteinO.I.H.G.S.X.
0.3134.50.88Os02g0257200AK103494.1-Conserved hypothetical protein2e+0At5g55750hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3032.70.85Os04g0390800AK108276.1-Short-chain dehydrogenase/reductase SDR familyprotein5e-8At3g47350short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.2931.10.88Os01g0728700AK108000.1-Conserved hypothetical protein3e-2At1g29680unknown proteinO.I.H.G.S.X.
0.2931.10.71Os02g0586900AK063583.1-Glycine rich family protein1e+0At2g16510vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)O.I.H.G.S.X.
0.2931.10.86Os01g0743500AY444338.1-NADP-dependent malic enzyme (EC 1.1.1.40)(NADP-ME)3e-47At5g11670ATNADP-ME2 (NADP-malic enzyme 2)O.I.H.G.S.X.
0.2831.10.87Os07g0298900AK064565.1-Heavy metal transport/detoxification proteindomain containing protein4e-2At3g48970copper-binding family proteinO.I.H.G.S.X.
0.2727.50.81Os05g0381400AK102039.1-ABA induced plasma membrane protein PM 192e+0At2g01755unknown proteinO.I.H.G.S.X.
0.2625.60.83Os12g0464400AK121922.1-Short-chain dehydrogenase/reductase SDR familyprotein4e-2At5g50700short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.2625.60.79Os06g0139800AK058604.1-Acid phosphatase-1(1) (Fragment)1e-2At4g29270acid phosphatase class B family proteinO.I.H.G.S.X.
0.2524.10.77Os03g0133100AK063608.1-Hypothetical protein5e+0At3g63020unknown proteinO.I.H.G.S.X.
0.2524.10.78Os01g0644200AY549310.1-Conserved hypothetical protein4e+0At3g03341unknown proteinO.I.H.G.S.X.
0.2524.10.82Os02g01862009630.m00845--8e-1At3g20130CYP705A22O.I.H.G.S.X.
0.2524.10.83Os12g0151000AK107301.1-Purple acid phosphatase2e-1At3g46120PAP19 (PURPLE ACID PHOSPHATASE 19)O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.598.7GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.198.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.598.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage