Co-expression analysis

Gene ID Os05g0569500
Gene name
Homology with ArabidopsisSimilar to At1g05510: - (HF=6e-10)
Module size 6 genes
NF 0.85
%ile 99.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.97Os05g0569500AF049892.1--6e-10At1g05510-O.I.H.G.S.X.
0.8395.80.97Os05g0140800AK110652.1-Glucose/ribitol dehydrogenase family protein7e-1At3g05260short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.8395.80.97Os03g0277500AK063650.1-Glyoxalase/bleomycin resistanceprotein/dioxygenase domain containing protein2e+1At4g38260unknown proteinO.I.H.G.S.X.
0.7391.10.97Os01g0702500AY333185.1-Dehydrin RAB253e-5At3g50980XERO1 (DEHYDRIN XERO 1)O.I.H.G.S.X.
0.7391.10.97Os04g0510900AK063625.1-Embryo-specific protein 1 (ATS1)9e+0At1g23240caleosin-related family proteinO.I.H.G.S.X.
0.6079.70.97Os03g0159600AK106743.1-Rab28 protein1e+1At3g14200DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.598.7GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.198.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.598.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the grape gene, 1621232_at, orthologous to the query gene, Os05g0569500

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.81621232_atAt1g05510hypothetical protein LOC100249843-1e-7At1g05510-O.I.H.G.S.X.
0.9198.81615612_atAt1g05510similar to cytosolic class II small heat-shock protein HSP17.5-2e-2At3g03490PEX19-1 (peroxin 19-1)O.I.H.G.S.X.
0.9198.81609355_atAt1g05510hypothetical protein LOC100255606-2e-6At2g21490LEA (DEHYDRIN LEA)O.I.H.G.S.X.
0.8394.61608715_atAt1g05510hypothetical protein LOC100258268-4e+0At5g10280ATMYB92 (MYB DOMAIN PROTEIN 92)O.I.H.G.S.X.
0.7792.31613370_atAt1g05510hypothetical protein LOC100246418-5e-4At1g29680unknown proteinO.I.H.G.S.X.
0.7390.81609832_atAt1g05510hypothetical protein LOC100267534-2e-8At2g42000plant EC metallothionein-like family 15 proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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