Co-expression analysis

Gene ID Os05g0569500
Gene name
Homology with ArabidopsisSimilar to At1g05510: - (HF=6e-10)
Module size 6 genes
NF 0.85
%ile 99.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.97Os05g0569500AF049892.1--6e-10At1g05510-O.I.H.G.S.X.
0.8395.80.97Os05g0140800AK110652.1-Glucose/ribitol dehydrogenase family protein7e-1At3g05260short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.8395.80.97Os03g0277500AK063650.1-Glyoxalase/bleomycin resistanceprotein/dioxygenase domain containing protein2e+1At4g38260unknown proteinO.I.H.G.S.X.
0.7391.10.97Os01g0702500AY333185.1-Dehydrin RAB253e-5At3g50980XERO1 (DEHYDRIN XERO 1)O.I.H.G.S.X.
0.7391.10.97Os04g0510900AK063625.1-Embryo-specific protein 1 (ATS1)9e+0At1g23240caleosin-related family proteinO.I.H.G.S.X.
0.6079.70.97Os03g0159600AK106743.1-Rab28 protein1e+1At3g14200DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.598.7GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.198.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.598.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.211846.1.S1_at, orthologous to the query gene, Os05g0569500

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5078.6PtpAffx.211846.1.S1_atAt1g05510hypothetical protein-8e-1At1g74870protein binding / zinc ion bindingO.I.H.G.S.X.
0.069.8PtpAffx.31076.1.A1_atAt1g05510--4e+0At5g64460-O.I.H.G.S.X.
0.058.3PtpAffx.93266.1.A1_atAt1g05510hypothetical protein-7e-24At3g1874060S ribosomal protein L30 (RPL30C)O.I.H.G.S.X.
0.046.9Ptp.1927.1.A1_atAt1g05510--4e+0At3g61190BAP1 (BON ASSOCIATION PROTEIN 1)O.I.H.G.S.X.
0.035.2PtpAffx.211445.1.S1_s_atAt1g05510hypothetical protein-4e+0At5g56760ATSERAT1O.I.H.G.S.X.
0.035.2PtpAffx.849.5.A1_atAt1g05510hypothetical protein-2e-42At3g2339060S ribosomal protein L36a/L44 (RPL36aA)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage