Co-expression analysis

Gene ID Os05g0567700
Gene name
Homology with ArabidopsisSimilar to At1g75220: integral membrane protein, putative (HF=2e-5)
Module size 43 genes
NF 0.27
%ile 27.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.90.88Os05g0567700AK065497.1-Integral membrane protein2e-5At1g75220integral membrane protein, putativeO.I.H.G.S.X.
0.4458.10.90Os02g0166600AK069371.1-Conserved hypothetical protein5e-2At5g39540-O.I.H.G.S.X.
0.4253.90.93Os03g0639600AK111569.1-Zinc-finger protein Lsd14e-5At4g20380zinc finger protein (LSD1)O.I.H.G.S.X.
0.4152.40.92Os03g0843100AK111499.1-Ras-related protein Rab-11B4e-11At1g09630ATRAB11C (ARABIDOPSIS RAB GTPASE 11C)O.I.H.G.S.X.
0.4152.40.91Os07g0553900AK070185.1-Hypothetical protein1e+0At4g16240unknown proteinO.I.H.G.S.X.
0.3846.90.93Os01g0959800CF277981-Phosphatidylserine decarboxylase1e-9At4g25970PSD3 (phosphatidylserine decarboxylase 3)O.I.H.G.S.X.
0.3846.90.94Os06g0714200BM419528-Calcium/calmodulin-dependent protein kinasehomolog|CaM kinase homolog|MCK1 protein8e-19At2g46700calcium-dependent protein kinase, putative / CDPK, putativeO.I.H.G.S.X.
0.3644.00.92Os03g0567600AK100305.1-Protein of unknown function DUF563 family protein1e-3At5g58000-O.I.H.G.S.X.
0.3541.70.91Os04g0550700AK106156.1-Conserved hypothetical protein3e+0At3g0556060S ribosomal protein L22-2 (RPL22B)O.I.H.G.S.X.
0.3541.70.93Os10g0476400AK072826.1-Snf7 family protein2e-34At1g03950VPS2.3 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2.3)O.I.H.G.S.X.
0.3440.00.91Os04g04519009632.m03567-Protein phosphatase 2C-like domain containingprotein6e-11At1g22280protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.3440.00.94Os06g0102700AK071080.1-Arm repeat-containing protein1e-6At3g46510PUB13 (PLANT U-BOX 13)O.I.H.G.S.X.
0.3440.00.94Os02g0750600AK066145.1-Ubiquitin domain containing protein6e-7At1g22050MUB6 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 6 PRECURSOR)O.I.H.G.S.X.
0.3338.80.95Os09g0557800AK071848.1-Nonaspanin (TM9SF) family protein5e-46At5g25100endomembrane protein 70, putativeO.I.H.G.S.X.
0.3236.30.90Os12g0596800AK065760.1-Ubiquitin interacting motif domain containingprotein1e-12At4g36860zinc ion bindingO.I.H.G.S.X.
0.3236.30.94Os03g0318600AB051294.1-Transcription factor HBP-1b(c38)4e-15At5g06950AHBP-1BO.I.H.G.S.X.
0.3032.70.92Os11g0588300AF402793.1-Glutathione transferase AtGST 10 (EC 2.5.1.18)2e-3At5g41210ATGSTT1 (GLUTATHIONE S-TRANSFERASE THETA 1)O.I.H.G.S.X.
0.3032.70.94Os03g0110300AK106206.1-Conserved hypothetical protein2e-3At2g28790osmotin-like protein, putativeO.I.H.G.S.X.
0.3032.70.93Os07g0632800NM_193100.1-Protein kinase domain containing protein1e-48At1g14000VIK (VH1-INTERACTING KINASE)O.I.H.G.S.X.
0.2831.10.90Os03g0808300AK109389.2-Remorin, C-terminal region domain containingprotein2e-1At1g05270TraB family proteinO.I.H.G.S.X.
0.2727.50.92Os04g0556300AY100689.1-Glutathione peroxidase-like protein GPX54Hv3e-33At4g11600ATGPX6 (GLUTATHIONE PEROXIDASE 6)O.I.H.G.S.X.
0.2727.50.94Os11g0199700AK073816.1--2e-2At1g21380VHS domain-containing protein / GAT domain-containing proteinO.I.H.G.S.X.
0.2727.50.92Os10g0400100AK067274.1-Methionyl-tRNA synthetase, class Ia domaincontaining protein8e-51At4g13780methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putativeO.I.H.G.S.X.
0.2625.60.90Os05g0564800AK120640.1-Conserved hypothetical protein1e-3At1g17080unknown proteinO.I.H.G.S.X.
0.2524.10.93Os02g0193800AK108424.1-ARM repeat fold domain containing protein6e-1At2g05117SCRL9 (SCR-Like 9)O.I.H.G.S.X.
0.2524.10.95Os01g0780500AF225922.1-SCAMP family protein1e-14At2g20840secretory carrier membrane protein (SCAMP) family proteinO.I.H.G.S.X.
0.2524.10.92Os03g0215000AK100038.1-Conserved hypothetical protein6e-14At1g76340integral membrane family proteinO.I.H.G.S.X.
0.2422.40.95Os02g0581300AK071553.1-ASC1 (Alternaria stem canker resistance protein)5e-8At3g25540LAG1O.I.H.G.S.X.
0.2422.40.95Os04g0517400AK059571.1-Conserved hypothetical protein5e-15At5g18480PGSIP6 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 6)O.I.H.G.S.X.
0.2321.20.92Os01g0936200AK101890.1-Lipase, class 3 family protein6e-3At5g18630lipase class 3 family proteinO.I.H.G.S.X.
0.2321.20.95Os09g0281700X59276.1-Ras-related protein RGP1 (GTP-binding regulatoryprotein RGP1)1e-17At5g47960ATRABA4CO.I.H.G.S.X.
0.2219.40.93Os09g0490200AK065473.1-EIL31e-12At1g73730EIL3 (ETHYLENE-INSENSITIVE3-LIKE3)O.I.H.G.S.X.
0.2016.50.93Os03g0101100AK120839.1-Palmitoyl protein thioesterase family protein6e-1At5g47330palmitoyl protein thioesterase family proteinO.I.H.G.S.X.
0.2016.50.94Os12g0600400AK066514.1-Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase)(Pyridoxal kinase- like protein SOS4) (Salt overlysensitive 4)4e-21At5g37850SOS4 (SALT OVERLY SENSITIVE 4)O.I.H.G.S.X.
0.1915.10.94Os12g0636800AK071648.1-Ubiquitin-conjugating enzyme 18 (Fragment)5e-13At5g42990UBC18 (ubiquitin-conjugating enzyme 18)O.I.H.G.S.X.
0.1915.10.95Os03g0638800CA767378-Protein kinase domain containing protein2e-32At3g22750protein kinase, putativeO.I.H.G.S.X.
0.1915.10.93Os08g0536000AK071782.1-Pyruvate dehydrogenase E1 beta subunit isoform 1(EC 1.2.4.1)9e-44At5g50850MAB1 (MACCI-BOU)O.I.H.G.S.X.
0.1915.10.90Os06g0656500AK068985.1--2e-2At3g212404CL2 (4-COUMARATE:COA LIGASE 2)O.I.H.G.S.X.
0.1712.60.95Os05g0102900AK065749.1-Snf7 family protein8e-28At3g10640VPS60.1O.I.H.G.S.X.
0.1510.30.92Os02g0131200AK069931.1-Glycosyl transferase, family 3 domain containingprotein8e-8At1g70570anthranilate phosphoribosyltransferase, putativeO.I.H.G.S.X.
0.149.30.92Os06g0622900AK065654.1-RNA-binding region containing protein 1 (HSRNASEB)(ssDNA binding protein SEB4) (CLL-associated antigenKW-5). Splice isoform 24e-3At1g78260RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.149.30.92Os11g0587500AK065976.1-RabGAP/TBC domain containing protein4e-6At4g27100RAB GTPase activatorO.I.H.G.S.X.
0.105.70.88Os03g0224200AK111864.1-Response regulator receiver domain containingprotein6e-12At2g01760ARR14 (ARABIDOPSIS RESPONSE REGULATOR 14)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.698.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.298.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.898.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.398.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0431GO:0006431The process of coupling methionine to methionyl-tRNA, catalyzed by methionyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.Link to AmiGO
0.0412GO:0000160A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.Link to AmiGO
0.0401GO:0006891The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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