VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB 0.91 98.9 0.98 Os05g0553000 AK071143.1 - ATP synthase beta chain, mitochondrial precursor(EC 3.6.3.14) 0 At5g08670 ATP binding / hydrogen ion transporting ATP synthase, rotational mechanism O.I. H.G. S.X. Please select KEGG (integral) Gramene (integral) KaPPA-View 4 (pathway) 0.80 94.6 0.98 Os01g0685800 NM_192090.1 - ATP synthase beta chain, mitochondrial precursor(EC 3.6.3.14) 6e-156 At5g08680 ATP synthase beta chain, mitochondrial, putative O.I. H.G. S.X. Please select KEGG (integral) Gramene (integral) KaPPA-View 4 (pathway) 0.67 87.2 0.98 Os01g0649100 AF444195.1 - Malate dehydrogenase 1e-33 At1g53240 malate dehydrogenase (NAD), mitochondrial O.I. H.G. S.X. Please select KEGG (integral) Gramene (integral) KaPPA-View 4 (pathway) 0.60 79.7 0.98 Os05g0301700 AK070578.1 - Cytochrome c1 (Fragment) 5e-79 At3g27240 cytochrome c1, putative O.I. H.G. S.X. Please select KEGG (integral) Gramene (integral) KaPPA-View 4 (pathway) 0.60 79.7 0.98 Os07g0495200 AK070990.1 - ATP synthase delta' chain, mitochondrial precursor(EC 3.6.3.14) 1e-1 At5g47030 ATP synthase delta' chain, mitochondrial O.I. H.G. S.X. Please select KEGG (integral) Gramene (integral) KaPPA-View 4 (pathway) 0.44 58.1 0.98 Os10g0320400 AK072694.1 - ATP synthase gamma chain, mitochondrial precursor(EC 3.6.3.14) 1e-48 At2g33040 ATP synthase gamma chain, mitochondrial (ATPC) O.I. H.G. S.X. Please select KEGG (integral) Gramene (integral) KaPPA-View 4 (pathway)
Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO 15.7 98.7 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays 14.5 98.6 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays 14.1 98.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays 11.9 98.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays 11.3 98.2 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays 10.4 98.1 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays 10.1 98.0 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays 10.1 98.0 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays 9.8 98.0 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays 9.8 98.0 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
SF Genes GO ID Process Name Link to AmiGO 0.111 1 GO:0006754 The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. 0.111 2 GO:0015986 The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis. 0.071 1 GO:0006099 A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
