Co-expression analysis

Gene ID Os05g0527800
Gene name
Homology with ArabidopsisSimilar to At5g17050: UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2) (HF=6e-5)
Module size 11 genes
NF 0.68
%ile 90.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9097.10.87Os05g0527800AK068336.1-The start codon is not identified.6e-5At5g17050UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2)O.I.H.G.S.X.
0.7391.10.90Os04g0305700AK068128.1-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein2e-1At2g43010PIF4 (phytochrome interacting factor 4)O.I.H.G.S.X.
0.6987.90.89Os01g0106300AK119550.1-Isoflavone reductase homolog IRL (EC 1.3.1.-)6e-1At2g34200zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6787.20.89Os02g0646500AF148877.1-Aldehyde dehydrogenase domain containing protein4e+0At5g01830armadillo/beta-catenin repeat family protein / U-box domain-containing proteinO.I.H.G.S.X.
0.6583.80.88Os03g0832800AK062843.1-Phospholipid/glycerol acyltransferase familyprotein4e-2At4g00400GPAT8 (glycerol-3-phosphate acyltransferase 8)O.I.H.G.S.X.
0.6483.40.89Os02g0590400AK099196.1-Lecithin:cholesterol acyltransferase familyprotein9e-1At5g63480unknown proteinO.I.H.G.S.X.
0.6281.50.88Os06g0289900CR280016-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein8e-1At2g37950zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6181.20.88Os04g0101400AK100972.1-Cytochrome P450 family protein1e-2At5g06900CYP93D1O.I.H.G.S.X.
0.6079.70.92Os06g0149100AK099064.1-Lipolytic enzyme, G-D-S-L family protein3e+0At5g22810GDSL-motif lipase, putativeO.I.H.G.S.X.
0.5777.00.90Os04g0454200AK072059.1-Monosaccharide transporter 16e-2At1g34580monosaccharide transporter, putativeO.I.H.G.S.X.
0.5269.60.88Os09g0373200AK109686.1-Strictosidine synthase family protein2e-1At5g20540ATBRXL4 (BREVIS RADIX-LIKE 4)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.099.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.498.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.398.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.398.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.798.8GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.498.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.198.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.898.7GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.798.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.298.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0561GO:0006306The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.Link to AmiGO
0.0401GO:0006629The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.Link to AmiGO
0.0201GO:0006310Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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