Co-expression analysis

Gene ID Os05g0518200
Gene name
Homology with ArabidopsisSimilar to At5g55130: CNX5 (CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 5) (HF=3e-2)
Module size 6 genes
NF 0.69
%ile 91.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4660.90.91Os05g0518200AK107178.1-Conserved hypothetical protein3e-2At5g55130CNX5 (CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 5)O.I.H.G.S.X.
0.7793.10.93Os01g0739700AK063960.1-Glycoside hydrolase, family 17 protein1e-6At4g29360glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.7391.10.93Os05g0589700AK068031.1-Dual-specific kinase DSK12e-28At3g13690protein kinase family proteinO.I.H.G.S.X.
0.6787.20.95Os03g0335500AK119808.1-Protein kinase domain containing protein5e-4At3g56370leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.6079.70.95Os06g0597400AB081950.1--4e-20At5g43810ZLL (ZWILLE)O.I.H.G.S.X.
0.5573.70.94Os06g0203800AK073793.1-ERECTA-like kinase 19e-18At2g26330ER (ERECTA)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.399.5GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.898.1GSM159269Cold stress, biological rep 2GSE6901Expression data for stress treatment in rice seedlingsLink to GEO
10.598.1GSM159270Cold stress, biological rep 3GSE6901Expression data for stress treatment in rice seedlingsLink to GEO
9.798.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM159268Cold stress, biological rep 1GSE6901Expression data for stress treatment in rice seedlingsLink to GEO
8.997.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.097.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2861GO:0019827The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.Link to AmiGO
0.2501GO:0048366The process whose specific outcome is the progression of the leaf over time, from its formation to the mature structure.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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