Co-expression analysis

Gene ID Os05g0515700
Gene name
Homology with ArabidopsisSimilar to At1g28520: VOZ1 (VASCULAR PLANT ONE ZINC FINGER PROTEIN) (HF=2e-14)
Module size 11 genes
NF 0.36
%ile 41.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7591.90.96Os05g0515700AK069076.1-Conserved hypothetical protein2e-14At1g28520VOZ1 (VASCULAR PLANT ONE ZINC FINGER PROTEIN)O.I.H.G.S.X.
0.4863.70.96Os06g0160400AK121877.1-Conserved hypothetical protein2e+0At1g53625unknown proteinO.I.H.G.S.X.
0.4355.40.96Os04g0485200AK069013.1-UBX domain containing protein1e-2At2g18530protein kinase family proteinO.I.H.G.S.X.
0.4051.10.96Os07g0295200AK102836.1-Protein of unknown function DUF167 family protein1e-29At5g63440unknown proteinO.I.H.G.S.X.
0.3541.70.97Os11g0206700AK069964.1-Guanine nucleotide binding protein (G-protein),alpha subunit family protein4e-29At1g31930XLG3 (extra-large GTP-binding protein 3)O.I.H.G.S.X.
0.3236.30.97Os06g0105600AK106556.1-Hypothetical protein3e-4At5g47480unknown proteinO.I.H.G.S.X.
0.3134.50.97Os04g0452400AK068069.1-Ubiquitin-specific protease 4 (UBP4)(At2g22310/T26C19.3)1e-42At2g22310ATUBP4 (ARABIDOPSIS THALIANA UBIQUITIN-SPECIFIC PROTEASE 4)O.I.H.G.S.X.
0.3134.50.98Os12g0165000AK112045.1-WD40-like domain containing protein3e+0At3g05090transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.3032.70.97Os01g0916200AK073904.1-Adaptin, N-terminal domain containing protein4e-35At1g31730epsilon-adaptin, putativeO.I.H.G.S.X.
0.2422.40.96Os01g0862300AK120353.1-Sorting nexin 12e-20At5g06140SNX1 (SORTING NEXIN 1)O.I.H.G.S.X.
0.2016.50.96Os06g0715600AK102724.1-Hypothetical protein6e-5At5g42470-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.798.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.497.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM302916endo6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
7.297.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.897.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.297.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0271GO:0007165The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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