Co-expression analysis

Gene ID Os05g0452800
Gene name
Homology with ArabidopsisSimilar to At5g05830: zinc finger (C3HC4-type RING finger) family protein (HF=9e-7)
Module size 10 genes
NF 0.28
%ile 27.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8295.00.92Os05g0452800AK102413.1-Zn-finger, RING domain containing protein9e-7At5g05830zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4253.90.94Os01g0107700AK070027.1-LIMONENE cyclase like protein3e-1At5g25820exostosin family proteinO.I.H.G.S.X.
0.4051.10.93Os12g0239000AK101424.1-Hypothetical protein1e-14At1g27850unknown proteinO.I.H.G.S.X.
0.3644.00.94Os03g0169000AK107189.1-Hypothetical plant protein family protein1e-9At1g14020unknown proteinO.I.H.G.S.X.
0.2727.50.94Os04g0678300AK102779.1-WD40-like domain containing protein8e-24At5g54200WD-40 repeat family proteinO.I.H.G.S.X.
0.2016.50.93Os02g0123100AK101344.1-Cell division control protein 2 homolog 2 (EC2.7.1.37)1e-14At3g48750CDC2 (CELL DIVISION CONTROL 2)O.I.H.G.S.X.
0.1915.10.93Os12g0565300AK073968.1-Calmodulin-binding protein MPCBP2e-14At2g43040NPG1 (no pollen germination 1)O.I.H.G.S.X.
0.1813.70.95Os10g0170000AK121907.1-Nucleotide-sensitive chloride conductanceregulator family protein2e+0At5g25890IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28)O.I.H.G.S.X.
0.1510.30.94Os04g0501700AK103837.1-Spc97/Spc98 family protein2e-8At5g17410tubulin family proteinO.I.H.G.S.X.
0.149.30.95Os08g0565700AK067640.1-SRA-YDG domain containing protein4e-6At2g33290SUVH2 (SU(VAR)3-9 HOMOLOG 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.698.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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