Co-expression analysis

Gene ID Os05g0437200
Gene name
Homology with ArabidopsisSimilar to At1g43130: LCV2 (LIKE COV 2) (HF=4e-24)
Module size 6 genes
NF 0.47
%ile 61.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.60.96Os05g0437200AK121867.1-Protein of unknown function DUF502 family protein4e-24At1g43130LCV2 (LIKE COV 2)O.I.H.G.S.X.
0.6787.20.95Os05g0419600CR281258-Conserved hypothetical protein3e-3At1g09645unknown proteinO.I.H.G.S.X.
0.6079.70.96Os01g0867900AK061366.1--2e-19At1g43130LCV2 (LIKE COV 2)O.I.H.G.S.X.
0.4355.40.96Os03g0275500AK060774.1-Epsin, N-terminal domain containing protein1e-3At2g25430epsin N-terminal homology (ENTH) domain-containing proteinO.I.H.G.S.X.
0.2931.10.97Os01g0556400CB657305-Heat shock protein DnaJ family protein4e-3At5g05750DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.1915.10.96Os02g0822400AK062258.1-No apical meristem (NAM) protein domain containingprotein5e-3At5g09330anac082 (Arabidopsis NAC domain containing protein 82)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.297.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.897.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM195224Suspension cellGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
6.597.2GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.196.6GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.196.6GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.096.6GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.896.5GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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