Co-expression analysis

Gene ID Os05g0414100
Gene name
Homology with ArabidopsisSimilar to At5g11930: glutaredoxin family protein (HF=2e-2)
Module size 8 genes
NF 0.42
%ile 52.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7893.40.91Os05g04141009633.m03166-Transcription factors TFIIS, elongin A, CRSP70,conserved domain containing protein2e-2At5g11930glutaredoxin family proteinO.I.H.G.S.X.
0.4458.10.93Os07g0446100NM_187038.1-Zn-finger, RING domain containing protein1e-5At3g23280zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family proteinO.I.H.G.S.X.
0.4051.10.93Os01g0957000AK099730.1-ATP-NAD/AcoX kinase family protein1e-28At3g21070NADK1 (NAD KINASE 1)O.I.H.G.S.X.
0.3644.00.96Os05g0585500AK070346.1-Calcium-dependent protein kinase1e-12At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)O.I.H.G.S.X.
0.3338.80.94Os06g0229200AK070606.1-Glycosyl transferase, family 31 protein7e-9At1g26810GALT1 (GALACTOSYLTRANSFERASE1)O.I.H.G.S.X.
0.3338.80.94Os03g0786000AK061286.1-Conserved hypothetical protein3e+0At3g07560PEX13 (PEROXIN 13)O.I.H.G.S.X.
0.3032.70.94Os09g0493700AK099237.1-No apical meristem (NAM) protein domain containingprotein3e-1At5g18270ANAC087O.I.H.G.S.X.
0.2727.50.93Os04g0442100AK067142.1-Smr protein/MutS2 C-terminal domain containingprotein4e+0At3g09863unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
53.099.9GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
11.098.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.098.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1051GO:0006298A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.Link to AmiGO
0.0671GO:0006486The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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