Co-expression analysis

Gene ID Os05g0406200
Gene name
Homology with ArabidopsisSimilar to At5g18860: inosine-uridine preferring nucleoside hydrolase family protein (HF=3e-4)
Module size 23 genes
NF 0.19
%ile 16.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8696.40.83Os05g04062009633.m03104-Inosine/uridine-preferring nucleoside hydrolasedomain containing protein3e-4At5g18860inosine-uridine preferring nucleoside hydrolase family proteinO.I.H.G.S.X.
0.3032.70.91Os05g0100500AK071466.1-Paired amphipathic helix protein Sin3a3e+0At5g65570pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.2931.10.96Os07g0693400NM_185572.1-ARM repeat fold domain containing protein4e-4At3g08960binding / protein transporterO.I.H.G.S.X.
0.2625.60.96Os04g0677800AK102572.1-Protein synthesis factor, GTP-binding domaincontaining protein1e-25At5g10630elongation factor 1-alpha, putative / EF-1-alpha, putativeO.I.H.G.S.X.
0.2524.10.88Os05g0257100AK101696.1-Leucine-rich repeat, plant specific containingprotein9e-4At1g13910leucine-rich repeat family proteinO.I.H.G.S.X.
0.2524.10.97Os01g0310800AK064374.1-Pto kinase interactor 14e-7At2g43230serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.2524.10.92Os07g04387009635.m02464-TLDc domain containing protein1e-1At2g05590-O.I.H.G.S.X.
0.2422.40.96Os12g0433200AK058760.1-Zn-finger, CCHC type domain containing protein5e+0At4g11700unknown proteinO.I.H.G.S.X.
0.2422.40.95Os06g0283200AK073829.1-Zn-finger-like, PHD finger domain containingprotein1e+0At1g08110lactoylglutathione lyase, putative / glyoxalase I, putativeO.I.H.G.S.X.
0.2321.20.97Os12g0225300AK121853.1-FAR1 domain containing protein7e-3At5g63740zinc finger protein-relatedO.I.H.G.S.X.
0.2321.20.96Os07g0466200AK106501.1-Conserved hypothetical protein2e-17At5g614502-phosphoglycerate kinase-relatedO.I.H.G.S.X.
0.2219.40.98Os05g0583500D43360-PX-associated domain containing protein4e+0At4g00355unknown proteinO.I.H.G.S.X.
0.2117.90.97Os07g0452400CA762394-3'-5' exonuclease domain containing protein3e-10At5g243403'-5' exonuclease domain-containing proteinO.I.H.G.S.X.
0.1915.10.96Os12g02910009640.m01914-DNA-directed DNA polymerase family protein4e-21At4g32700-O.I.H.G.S.X.
0.1813.70.95Os10g0318000AK068235.1-Conserved hypothetical protein4e-1At3g61060AtPP2-A13 (Arabidopsis thaliana phloem protein 2-A13)O.I.H.G.S.X.
0.1813.70.95Os07g0160000NM_186392.1-Peptidase C19, ubiquitin carboxyl-terminalhydrolase 2 family protein2e-15At5g22030UBP8 (UBIQUITIN-SPECIFIC PROTEASE 8)O.I.H.G.S.X.
0.1712.60.93Os06g0633900CA756504-Esterase/lipase/thioesterase domain containingprotein7e+0At4g31441unknown proteinO.I.H.G.S.X.
0.1712.60.95Os12g0407900AK106427.1-Protein prenyltransferase domain containingprotein4e+0At5g02750zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1510.30.93Os08g0520500AK111639.1-Auxin response factor 22e-6At1g19220ARF19 (AUXIN RESPONSE FACTOR 19)O.I.H.G.S.X.
0.138.20.92Os10g0560700AK064207.1-Pathogenesis-related transcriptional factor andERF domain containing protein2e-2At3g06870proline-rich family proteinO.I.H.G.S.X.
0.138.20.89Os02g0705500AK119183.1-Basic helix-loop-helix dimerisation region bHLHdomain containing protein7e-4At4g36540BEE2 (BR Enhanced Expression 2)O.I.H.G.S.X.
0.127.20.96Os01g0613900AK119181.1-Protein of unknown function UPF0052 and CofDfamily protein1e-15At2g34090MEE18 (maternal effect embryo arrest 18)O.I.H.G.S.X.
0.073.70.87Os02g0199300AK064726.1-Peptidylprolyl isomerase, FKBP-type domaincontaining protein2e-6At4g26555immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
27.999.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
21.799.2GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.998.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.697.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0671GO:0006417Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA.Link to AmiGO
0.0411GO:0007242A series of reactions within the cell that occur as a result of a single trigger reaction or compound.Link to AmiGO
0.0291GO:0006511The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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